RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 NCANO14594 1321 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
PRPF40A-201ENST00000354363 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 NFICP08651 508 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 PSMC3P17980 439 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 VIPR2P41587 438 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 CSTF1Q05048 431 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 DUSP4Q13115 394 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 PLD1Q13393 1074 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 MYBPC2Q14324 1141 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 CENPPQ6IPU0 288 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TMC8Q8IU68 726 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 ZNF687Q8N1G0 1237 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 SUMF1Q8NBK3 374 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 ZSCAN18Q8TBC5 510 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 IRF7Q92985 503 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TMEM209Q96SK2 561 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 ZNF334Q9HCZ1 680 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TRPV5Q9NQA5 729 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 GPR179Q6PRD1 2367 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 MTMR11A4FU01 709 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TISP43B9A030 160 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 SPTLC1O15269 473 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 GDI1P31150 447 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 ABCD1P33897 745 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 DDIT3P35638 169 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 EPHB3P54753 998 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 FOXK2Q01167 660 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 ZC2HC1CQ53FD0 456 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 C9orf57Q5W0N0 161 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 DEPDC1BQ8WUY9 529 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 SLC27A5Q9Y2P5 690 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 DERAQ9Y315 318 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 FRYLO94915 3013 aa15.68■□□□□ 0.1
PRPF40A-201ENST00000354363 OBSL1O75147 1896 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 A0A1W2PRU2 124 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ANO9A1A5B4 782 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 PIRO00625 290 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 MAN2B1O00754 1011 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ODC1P11926 461 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 PAX3P23760 479 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ALDH1A3P47895 512 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ACOT2P49753 483 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 USP49Q70CQ1 688 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 MFSD6LQ8IWD5 586 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 KIAA2013Q8IYS2 634 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 TTC9BQ8N6N2 239 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ATAD1Q8NBU5 361 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 RUBCNQ92622 972 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 BORCS6Q96GS4 357 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 EPSTI1Q96J88 318 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 ST6GALNAC4Q9H4F1 302 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 SLITRK6Q9H5Y7 841 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 NDRG2Q9UN36 371 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 STYXL1Q9Y6J8 313 aa15.67■□□□□ 0.1
PRPF40A-201ENST00000354363 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 HEPACAM2A8MVW5 462 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 CUL4AQ13619 759 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 PTPAQ15257 358 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 ADALQ6DHV7 355 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 DCLK2Q8N568 766 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 NELL1Q92832 810 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 ASB7Q9H672 318 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 PRMT8Q9NR22 394 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 AGO2Q9UKV8 859 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 PCDHGA2Q9Y5H1 932 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
PRPF40A-201ENST00000354363 ARNTLO00327 626 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ZNF263O14978 683 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 SOAT2O75908 522 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 CYP11A1P05108 521 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 MTAPQ13126 283 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 STXBP5Q5T5C0 1151 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 SLFN12LQ6IEE8 588 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 TSSK4Q6SA08 328 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 DYMQ7RTS9 669 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ZNF720Q7Z2F6 126 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ERMP1Q7Z2K6 904 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 SFR1Q86XK3 245 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ZBTB44Q8NCP5 570 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 OR10T2Q8NGX3 314 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ATRIPQ8WXE1 791 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 FAM3CQ92520 227 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 PSMG2Q969U7 264 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 E2F7Q96AV8 911 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 IKZF4Q9H2S9 585 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 CHRDQ9H2X0 955 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ZSCAN32Q9NX65 697 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 C2CD2Q9Y426 696 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 ASB3Q9Y575 518 aa15.65■□□□□ 0.1
PRPF40A-201ENST00000354363 PIAS3Q9Y6X2 628 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms