RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 FERMT1Q9BQL6 677 aa3.95□□□□□ -1.78
RNF38-203ENST00000353739 KIFC3Q9BVG8 833 aa3.95□□□□□ -1.78
RNF38-203ENST00000353739 NKIRAS1Q9NYS0 192 aa3.95□□□□□ -1.78
RNF38-203ENST00000353739 NOVA2Q9UNW9 492 aaKnown RBP3.95□□□□□ -1.78
RNF38-203ENST00000353739 SNX24Q9Y343 169 aa3.95□□□□□ -1.78
RNF38-203ENST00000353739 ADGRA3Q8IWK6 1321 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZNF236Q9UL36 1845 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 GSTTP1A0A1W2PQM5 241 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RRN3P2A6NIE6 340 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TISP43B9A030 160 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TRAPPC3O43617 180 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 SPAG6O75602 509 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RGS20O76081 388 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZBTB7AO95365 584 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 VNN1O95497 513 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RPLP2P05387 115 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 GSTA1P08263 222 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 PROZP22891 400 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 SSR1P43307 286 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 RPL21P46778 160 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 GCLCP48506 637 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CCT5P48643 541 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MYO1EQ12965 1108 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZNF268Q14587 947 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CPLX4Q7Z7G2 160 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TADA2BQ86TJ2 420 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 GBP7Q8N8V2 638 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CCDC197Q8NCU1 140 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 DYDC1Q8WWB3 177 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TATDN2Q93075 761 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 HAUS1Q96CS2 278 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 CHMP6Q96FZ7 201 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZFP91Q96JP5 570 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 SYNCQ9H7C4 482 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 VRTNQ9H8Y1 702 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 POLD4Q9HCU8 107 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TMEM51Q9NW97 253 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 GRHL1Q9NZI5 618 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 PPP1R1BQ9UD71 204 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 LGALS13Q9UHV8 139 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 CPSF3Q9UKF6 684 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CFAP69A5D8W1 941 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZNF487B1APH4 448 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MEFVO15553 781 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 KRT14P02533 472 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ITGAVP06756 1048 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RARAP10276 462 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 VDRP11473 427 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 AXLP30530 894 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 HPDP32754 393 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 MAGOHP61326 146 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 SP4Q02446 784 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RASA2Q15283 850 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 UAP1Q16222 522 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 KLHL38Q2WGJ6 581 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZFYVE27Q5T4F4 411 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 DPY19L2Q6NUT2 758 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 CENPUQ71F23 418 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MAP7D3Q8IWC1 876 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 TRPM4Q8TD43 1214 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ATXN2LQ8WWM7 1075 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 PRPF31Q8WWY3 499 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 ALG3Q92685 438 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 XPO6Q96QU8 1125 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CELF4Q9BZC1 486 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 OSBPL8Q9BZF1 889 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 INO80BQ9C086 356 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 KDM4CQ9H3R0 1056 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 SSU72Q9NP77 194 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 CYLDQ9NQC7 956 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TOPORSQ9NS56 1045 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 SHOC2Q9UQ13 582 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 FAM169AQ9Y6X4 670 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 LCTP09848 1927 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 H0YHG0 523 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 O00370 1275 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 STRNO43815 780 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 FSBPO95073 299 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 GSTA2P09210 222 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MMP13P45452 471 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 SLC18A1P54219 525 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 NFX1Q12986 1120 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 PDCLQ13371 301 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TTLL12Q14166 644 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 TFDP3Q5H9I0 405 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 KCTD16Q68DU8 428 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZDHHC24Q6UX98 284 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TDRPQ86YL5 185 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MYCBPAPQ8TBZ2 947 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 RIN2Q8WYP3 895 aaPredicted RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 ZNF516Q92618 1163 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 USP6NLQ92738 828 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 DDX27Q96GQ7 796 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 C11orf70Q9BRQ4 267 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 MAK16Q9BXY0 300 aaKnown RBP3.94□□□□□ -1.78
RNF38-203ENST00000353739 BCO2Q9BYV7 579 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 TRIM31Q9BZY9 425 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 FZD8Q9H461 694 aa3.94□□□□□ -1.78
RNF38-203ENST00000353739 EFCC1Q9HA90 598 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms