RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CYP1B1Q16678 543 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 XKR4Q5GH76 650 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF667Q5HYK9 610 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 LIN9Q5TKA1 542 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 EMBQ6PCB8 327 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ALKAL1Q6UXT8 129 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 RUFY4Q6ZNE9 571 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 APBB1IPQ7Z5R6 666 aaPredicted RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CPNE8Q86YQ8 564 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 IFT20Q8IY31 132 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 WDTC1Q8N5D0 677 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 UBL4BQ8N7F7 174 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 TRPV1Q8NER1 839 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CAVIN3Q969G5 261 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 LENG1Q96BZ8 264 aaPredicted RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 FAM122AQ96E09 287 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 BTBD6Q96KE9 485 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ACAP3Q96P50 834 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 PPP1R16BQ96T49 567 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 NAP1L3Q99457 506 aaPredicted RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ADPGKQ9BRR6 497 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 AP5M1Q9H0R1 490 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 UPF3AQ9H1J1 476 aaKnown RBP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 LHX5Q9H2C1 402 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 CDHR5Q9HBB8 845 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ADAM22Q9P0K1 906 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 ITGA11Q9UKX5 1188 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 POLIQ9UNA4 740 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 NR2E1Q9Y466 385 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 PKD1L2Q7Z442 2459 aa7.37□□□□□ -1.23
TRIM55-203ENST00000350034 FAM170AA1A519 330 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM110-MUSTN1A8MSY1 372 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TNPO2O14787 897 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 FSCN2O14926 492 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 CILPO75339 1184 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ITGB3P05106 788 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 CALB1P05937 261 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 PYGMP11217 842 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 CYBAP13498 195 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 AKR1A1P14550 325 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 FGFR4P22455 802 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 BRD2P25440 801 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ECHS1P30084 290 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 AARSP49588 968 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 RAD23BP54727 409 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 EPHB4P54760 987 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 GSCP56915 257 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 RWDD2BP57060 319 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 GJA9P57773 515 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 PURAQ00577 322 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 PAK2Q13177 524 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF211Q13398 564 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SMC1AQ14683 1233 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM132DQ14C87 1099 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SNX17Q15036 470 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SIX1Q15475 284 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 FSCN1Q16658 493 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 KIZQ2M2Z5 673 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 PPP1R15BQ5SWA1 713 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 UBXN11Q5T124 520 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SLC27A1Q6PCB7 646 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 CHRDL2Q6WN34 429 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 MMS22LQ6ZRQ5 1243 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SLC13A5Q86YT5 568 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 KLHL7Q8IXQ5 586 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 GSPT2Q8IYD1 628 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ZDHHC14Q8IZN3 488 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM130Q8N3G9 435 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 NME8Q8N427 588 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 MREGQ8N565 214 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 PRELID2Q8N945 189 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM35BQ8NCS4 154 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 FEZF2Q8TBJ5 459 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SCLT1Q96NL6 688 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TSPAN18Q96SJ8 248 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 C11orf70Q9BRQ4 267 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 KATNAL1Q9BW62 490 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 AP1M1Q9BXS5 423 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 TRIM7Q9C029 511 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ELOVL4Q9GZR5 314 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 FAM49AQ9H0Q0 323 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 EPB41L5Q9HCM4 733 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 MRPL47Q9HD33 250 aaKnown RBP7.36□□□□□ -1.23
TRIM55-203ENST00000350034 ANAPC7Q9UJX3 599 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 HPCAL4Q9UM19 191 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 SCINQ9Y6U3 715 aa7.36□□□□□ -1.23
TRIM55-203ENST00000350034 C17orf102A2RUQ5 167 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 FAM187AA6NFU0 413 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM191CA6NGB0 347 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 ZSCAN5CA6NGD5 496 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 H3BQF6 201 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 MYO1FO00160 1098 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms