RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GALNT4Q8N4A0 578 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 TMIGD2Q96BF3 282 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ZFYVE28Q9HCC9 887 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MRGBPQ9NV56 204 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ABCB11O95342 1321 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 TCRBV7S2A1N4TA0A589 114 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 THAP12O43422 761 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MGEA5O60502 916 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CPA3P15088 417 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CDH3P22223 829 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PHBP35232 272 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MCAMP43121 646 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PHKA2P46019 1235 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 SLC5A3P53794 718 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 TRIP10Q15642 601 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MAPK6Q16659 721 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 FYB2Q5VWT5 728 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ITPRIPL1Q6GPH6 555 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CCDC105Q8IYK2 499 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ANKRD35Q8N283 1001 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PPM1KQ8N3J5 372 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 C4orf32Q8N8J7 132 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CAPN8A6NHC0 703 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 SFI1A8K8P3 1242 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 AP1G1O43747 822 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 IDH1O75874 414 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 FBXO21O94952 628 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 APBA3O96018 575 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 RBP3P10745 1247 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 KRT81Q14533 505 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 SF3B4Q15427 424 aaKnown RBP eCLIP11.22□□□□□ -0.617e-8■■■■□ 26.4
CAPN3-203ENST00000349748 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 IRF2BP2Q7Z5L9 587 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PASD1Q8IV76 773 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 HIPK4Q8NE63 616 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF75CPQ92670 426 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 RNF26Q9BY78 433 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 OSBPL6Q9BZF3 934 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PAIP1Q9H074 479 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 BHMT2Q9H2M3 363 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 MRPL46Q9H2W6 279 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 FLT1P17948 1338 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TSPY2A6NKD2 308 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 A8MU76 341 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 GNPATO15228 680 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TP73O15350 636 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TBC1D12O60347 775 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TTC4O95801 387 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 ENO1P06733 434 aaKnown RBP11.21□□□□□ -0.61
CAPN3-203ENST00000349748 H2AFZP0C0S5 128 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TSPY3P0CV98 308 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TSPY8P0CW00 308 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 ABCB4P21439 1286 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TSPY1Q01534 308 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 SEPT6Q14141 434 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 E2F2Q14209 437 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 NR1D2Q14995 579 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
CAPN3-203ENST00000349748 INTS5Q6P9B9 1019 aaKnown RBP11.21□□□□□ -0.61
CAPN3-203ENST00000349748 DTHD1Q6ZMT9 781 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 H2AFVQ71UI9 128 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 RASGRP4Q8TDF6 673 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 MRRFQ96E11 262 aaKnown RBP11.21□□□□□ -0.61
CAPN3-203ENST00000349748 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.61
CAPN3-203ENST00000349748 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 ANKRD34BA5PLL1 514 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 NOTOA8MTQ0 251 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 GNA11P29992 359 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 MARCKSL1P49006 195 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 NCKAP1LP55160 1127 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 KDSRQ06136 332 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 CALCOCO2Q13137 446 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.62
CAPN3-203ENST00000349748 C6orf163Q5TEZ5 329 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 ILDR2Q71H61 639 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 C11orf74Q86VG3 221 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 ERI1Q8IV48 349 aaKnown RBP11.21□□□□□ -0.62
CAPN3-203ENST00000349748 CCDC110Q8TBZ0 833 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 FAM89AQ96GI7 184 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 CNBD2Q96M20 576 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 CSRNP1Q96S65 589 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 C12orf65Q9H3J6 166 aaKnown RBP11.21□□□□□ -0.62
CAPN3-203ENST00000349748 EHD1Q9H4M9 534 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 S100A14Q9HCY8 104 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms