RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATP6V0A4Q9HBG4 840 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TXNRD2Q9NNW7 524 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 UVRAGQ9P2Y5 699 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 NAALADL1Q9UQQ1 740 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 IGKV6D-21A0A0A0MT36 114 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GOLGA6L10A0A0M3HER8 536 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 A0A1W2PPM1 405 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TCP11X1B4DZS4 312 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 FARP2O94887 1054 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC172P0C7W6 258 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 GARTP22102 1010 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF132P52740 706 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 KCNJ2P63252 427 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 CETN1Q12798 172 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ALCAMQ13740 583 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PLEKHA7Q6IQ23 1121 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 FUKQ8N0W3 1084 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 EMC1Q8N766 993 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 NSUN6Q8TEA1 469 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 LPIN3Q9BQK8 851 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM121Q9BTD3 319 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ASCC2Q9H1I8 757 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 TAOK3Q9H2K8 898 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 ASIC3Q9UHC3 531 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PCDHB2Q9Y5E7 798 aa6.42□□□□□ -1.38
CLCN3-201ENST00000347613 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.42□□□□□ -1.38
CLCN3-201ENST00000347613 PODXLO00592 558 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ASAP2O43150 1006 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 SPAG7O75391 227 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 USP2O75604 605 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TTC4O95801 387 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PSAPP07602 524 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CLTAP09496 248 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 SRGAP2CP0DJJ0 459 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 POLGP54098 1239 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 NOP14P78316 857 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PTK6Q13882 451 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 P3H1Q32P28 736 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PPP1R15BQ5SWA1 713 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 EEF1DP3Q658K8 133 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ICE2Q659A1 982 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 DENND1BQ6P3S1 775 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CPLX4Q7Z7G2 160 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC50Q8IVM0 306 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 SLCO2A1Q92959 643 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ARHGEF2Q92974 986 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CABS1Q96KC9 395 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC114Q96M63 670 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 MCEEQ96PE7 176 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TRAIPQ9BWF2 469 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PDGFCQ9NRA1 345 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ADAM22Q9P0K1 906 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PIM2Q9P1W9 311 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CNTN6Q9UQ52 1028 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM191CA6NGB0 347 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 THAP12O43422 761 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 OATP04181 439 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM191BP0C7N4 346 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 RFC1P35251 1148 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 BAG6P46379 1132 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ZKSCAN8Q15776 578 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CYP4F22Q6NT55 531 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 IGDCC3Q8IVU1 814 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 FITM2Q8N6M3 262 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 PRCCQ92733 491 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 HVCN1Q96D96 273 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 CLMNQ96JQ2 1002 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 SLITRK1Q96PX8 696 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TRIM56Q9BRZ2 755 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 MSTO1Q9BUK6 570 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 OSBPL8Q9BZF1 889 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 XYLT2Q9H1B5 865 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 SLCO1B3Q9NPD5 702 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF302Q9NR11 478 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 NME7Q9Y5B8 376 aa6.41□□□□□ -1.38
CLCN3-201ENST00000347613 ATXN2Q99700 1313 aaKnown RBP6.41□□□□□ -1.38
CLCN3-201ENST00000347613 K7ERI5 159 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 FZD9O00144 591 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 HCRTO43612 131 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 CNMDO75829 334 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 MMP8P22894 467 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 ADCY8P40145 1251 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 ASPAP45381 313 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 GPX6P59796 221 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 TRAF1Q13077 416 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 NCOA4Q13772 614 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 FNBP1LQ5T0N5 605 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 HIBCHQ6NVY1 386 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 KIF2BQ8N4N8 673 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 MAML1Q92585 1016 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 CENPTQ96BT3 561 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 NAP1L3Q99457 506 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM109Q9BVC6 243 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 C1orf112Q9NSG2 853 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 KLC4Q9NSK0 619 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 INTS9Q9NV88 658 aaKnown RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 GJD2Q9UKL4 321 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms