RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.82
ATG4A-202ENST00000345734 PTPRHQ9HD43 1115 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF446Q9NWS9 450 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 A0A087WZ62 844 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 OGTO15294 1046 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 MAGEB2O15479 319 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ASAP2O43150 1006 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 DYNC1LI2O43237 492 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 MMEP08473 750 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 HOXD8P13378 290 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 KRT5P13647 590 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CYP11B1P15538 503 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CYP2C19P33261 490 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 OSTNP61366 133 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 FOXK2Q01167 660 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 FMO1Q01740 532 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 GCNT1Q02742 428 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 TNFAIP2Q03169 654 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CKAP4Q07065 602 aaKnown RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 C2orf54Q08AI8 447 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 PPFIA1Q13136 1202 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 GRIK4Q16099 956 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 MPZL3Q6UWV2 235 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ATCAYQ86WG3 371 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 FDXACB1Q9BRP7 624 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 THAP2Q9H0W7 228 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ZFAND3Q9H8U3 227 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 C1orf112Q9NSG2 853 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 SLC5A4Q9NY91 659 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 LRFN2Q9ULH4 789 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 NCANO14594 1321 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 UMODL1Q5DID0 1318 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 A0A0A6YYK5 440 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 FTLP02792 175 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM253P0C7T8 217 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 TCP1P17987 556 aaKnown RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CYP2B6P20813 491 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 RELBQ01201 579 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 DGKDQ16760 1214 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 MARCH8Q5T0T0 291 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF697Q5TEC3 545 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 OLFML2BQ68BL8 750 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 EGFL6Q8IUX8 553 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 SLC35G2Q8TBE7 412 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CTNNBL1Q8WYA6 563 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 DDX1Q92499 740 aaKnown RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 OGFRQ9NZT2 677 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
ATG4A-202ENST00000345734 WASF2Q9Y6W5 498 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 COL1A2P08123 1366 aa9.89□□□□□ -0.83
ATG4A-202ENST00000345734 TRIP11Q15643 1979 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 MEN1O00255 615 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 SEC31AO94979 1220 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CST3P01034 146 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF865P0CJ78 1059 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 PHKA2P46019 1235 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 IFI16Q16666 785 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ENOSF1Q7L5Y1 443 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 MSL3Q8N5Y2 521 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 MSANTD4Q8NCY6 345 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 RFFLQ8WZ73 363 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 USP6NLQ92738 828 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CPB2Q96IY4 423 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ASB16Q96NS5 453 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 NFKBIZQ9BYH8 718 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CDT1Q9H211 546 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF395Q9H8N7 513 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 SETD4Q9NVD3 440 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CHORDC1Q9UHD1 332 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 COG5Q9UP83 839 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 NUB1Q9Y5A7 615 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 FAM155AB1AL88 458 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 GPR25O00155 361 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 PHACTR2O75167 634 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 HOXC6P09630 235 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ACO1P21399 889 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CTGFP29279 349 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 PDE6CP51160 858 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 NOP14P78316 857 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CDR2Q01850 454 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CUL2Q13617 745 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 SLFN11Q7Z7L1 901 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 WDR49Q8IV35 697 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM130Q8N3G9 435 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ZCCHC17Q9NP64 241 aaKnown RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 PRMT7Q9NVM4 692 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms