RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MMADHCQ9H3L0 296 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 F5H423 210 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 FAM58BPP0C7Q3 252 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 NPR1P16066 1061 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 EPHB2P29323 1055 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 SESN2P58004 480 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 GRAPQ13588 217 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 FRA10AC1Q70Z53 315 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 C1orf131Q8NDD1 294 aaKnown RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 FRMD8P1Q9BZ68 369 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 DHX35Q9H5Z1 703 aaKnown RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 NAALADL1Q9UQQ1 740 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 SERPINI2O75830 405 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 PPARGP37231 505 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 AASDHQ4L235 1098 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 ILDR1Q86SU0 546 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 SYNE4Q8N205 404 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 PIGBQ92521 554 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 GFAPP14136 432 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 SPRP35270 261 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 SNRPFP62306 86 aaKnown RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 NSUN2Q08J23 767 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMC4-201ENST00000344722 MAGEC3Q8TD91 643 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ATP8B4Q8TF62 1192 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 MCEEQ96PE7 176 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 GIMAP4Q9NUV9 329 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 CPSF3Q9UKF6 684 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 HNRNPRO43390 633 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 ABL1P00519 1130 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 TNFAIP2Q03169 654 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 COG4Q9H9E3 785 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ABCF3Q9NUQ8 709 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ACAD10Q6JQN1 1059 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ZNF571Q7Z3V5 609 aaPredicted RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 TMEM237Q96Q45 408 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 AGO2Q9UKV8 859 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 HMOX2P30519 316 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 HSPA2P54652 639 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ERMARDQ5T6L9 678 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 RWDD4Q6NW29 188 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 CLEC4GQ6UXB4 293 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 ZNF662Q6ZS27 426 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 PSPC1Q8WXF1 523 aaKnown RBP18.9■□□□□ 0.62
SMC4-201ENST00000344722 PGBD4Q96DM1 585 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 CNDP1Q96KN2 507 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 TEKT2Q9UIF3 430 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
SMC4-201ENST00000344722 E9PCH4 1651 aa18.89■□□□□ 0.62
SMC4-201ENST00000344722 SLC4A1P02730 911 aa18.89■□□□□ 0.62
SMC4-201ENST00000344722 ADARP55265 1226 aaKnown RBP18.89■□□□□ 0.62
SMC4-201ENST00000344722 IFI35P80217 286 aaPredicted RBP18.89■□□□□ 0.62
SMC4-201ENST00000344722 METTL23Q86XA0 190 aa18.89■□□□□ 0.62
SMC4-201ENST00000344722 PAGR1Q9BTK6 254 aa18.89■□□□□ 0.62
SMC4-201ENST00000344722 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.62
SMC4-201ENST00000344722 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 ARHGEF37A1IGU5 675 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 UGP2Q16851 508 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 NCAPG2Q86XI2 1143 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 SH3GL2Q99962 352 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 STAP1Q9ULZ2 295 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
SMC4-201ENST00000344722 GRB10Q13322 594 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 MAPK6Q16659 721 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 SYCP2LQ5T4T6 812 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 BNC2Q6ZN30 1099 aaPredicted RBP18.89■□□□□ 0.61
SMC4-201ENST00000344722 PAWRQ96IZ0 340 aaKnown RBP18.89■□□□□ 0.61
SMC4-201ENST00000344722 RSAD1Q9HA92 442 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 SNX3O60493 162 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 TNFAIP8O95379 198 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 GSTT1P30711 240 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 AQP5P55064 265 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 PPIDQ08752 370 aaKnown RBP18.89■□□□□ 0.61
SMC4-201ENST00000344722 STX5Q13190 355 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 KRR1Q13601 381 aaKnown RBP18.89■□□□□ 0.61
SMC4-201ENST00000344722 C11orf63Q6NUN7 778 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 KLHL25Q9H0H3 589 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 TASP1Q9H6P5 420 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 DLC1Q96QB1 1528 aa18.89■□□□□ 0.61
SMC4-201ENST00000344722 LRRC10BA6NIK2 292 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 DGKIO75912 1065 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 WDR47O94967 919 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 PDAP1Q13442 181 aaKnown RBP18.88■□□□□ 0.61
SMC4-201ENST00000344722 SNRNP35Q16560 246 aaKnown RBP18.88■□□□□ 0.61
SMC4-201ENST00000344722 IMPG1Q17R60 797 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 IYDQ6PHW0 289 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 PID1Q7Z2X4 250 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 BCS1LQ9Y276 419 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 ZNF839A8K0R7 811 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 ALBP02768 609 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 ITGA4P13612 1032 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 RGS2P41220 211 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 KBTBD12Q3ZCT8 623 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 EFHC2Q5JST6 749 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms