RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TMEM114B3SHH9 223 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RGS13O14921 159 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SUPT3HO75486 399 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SOX30O94993 753 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 EXOSC10Q01780 885 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NSUN2Q08J23 767 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF713Q8N859 430 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 DEPTORQ8TB45 409 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TLDC2A0PJX2 215 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PIPSLA2A3N6 862 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 GGPS1O95749 300 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ITGA2BP08514 1039 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 FDPSP14324 419 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ATF7P17544 494 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 WARSP23381 471 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 IST1P53990 364 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 DSTNP60981 165 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PHC1P78364 1004 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RNF43Q68DV7 783 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AMER2Q8N7J2 671 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SLC25A36Q96CQ1 311 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MRPL9Q9BYD2 267 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 KAT14Q9H8E8 782 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 POLG2Q9UHN1 485 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 FPGTO14772 594 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 IFNL1Q8IU54 200 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC71Q8IV32 467 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 OR6C65A6NJZ3 312 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PSIP1O75475 530 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NOL4O94818 638 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PRG2P13727 222 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PDHA2P29803 388 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ANKRD40Q6AI12 368 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TDRD1Q9BXT4 1180 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 LRMDAQ9H2I8 198 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TAS2R7Q9NYW3 318 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NFE2L3Q9Y4A8 694 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 APAF1O14727 1248 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PDE8AO60658 829 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RB1P06400 928 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ATF2P15336 505 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MFSD5Q6N075 450 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MDM1Q8TC05 714 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NCLNQ969V3 563 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.93□□□□□ -1.783e-8■■■■■ 70.6
SYNE2-202ENST00000344113 VANGL2Q9ULK5 521 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MAGED2Q9UNF1 606 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 UNC5CO95185 931 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CASP5P51878 434 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ELF3P78545 371 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RINT1Q6NUQ1 792 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NOA1Q8NC60 698 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 POF1BQ8WVV4 589 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 DHRS9Q9BPW9 319 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 C19orf44Q9H6X5 657 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 COX16Q9P0S2 106 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ZRANB1Q9UGI0 708 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 KDM5CP41229 1560 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RP1P56715 2156 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MYO10Q9HD67 2058 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 BCL10O95999 233 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SMCO1Q147U7 214 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 EXOC3L1Q86VI1 746 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MMAAQ8IVH4 418 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 HACE1Q8IYU2 909 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 APOPT1Q96IL0 206 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SEC16BQ96JE7 1060 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RPRD1BQ9NQG5 326 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SOX13Q9UN79 622 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TLR6Q9Y2C9 796 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PCDHGA11Q9Y5H2 935 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SNX14Q9Y5W7 946 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 N4BP1O75113 896 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MBD4O95243 580 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP12P59046 1061 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PHKG1Q16816 387 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SNRNP48Q6IEG0 339 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM65Q6PJ69 517 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CSRNP1Q96S65 589 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 LRRC19Q9H756 370 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ERBINQ96RT1 1412 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 LGR5O75473 907 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 C8BP07358 591 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NCAM1P13591 858 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 P4HA1P13674 534 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 GJA1P17302 382 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RAB2AP61019 212 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SELPLGQ14242 412 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 DGUOKQ16854 277 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CASC4Q6P4E1 433 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 BTBD6Q96KE9 485 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 C17orf75Q9HAS0 396 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PCDHB5Q9Y5E4 795 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TOP2AP11388 1531 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 FAM47DPA6NHR8 397 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 POLR2CP19387 275 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TALDO1P37837 337 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NAB1Q13506 487 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TRPV1Q8NER1 839 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 OR5T2Q8NGG2 359 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms