RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 WNT8AQ9H1J5 351 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 USP29Q9HBJ7 922 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 PADI4Q9UM07 663 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF711Q9Y462 761 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 GTPBP10A4D1E9 387 aaKnown RBP8.58□□□□□ -1.04
ATG4A-201ENST00000343524 GOLGA8TH3BQL2 631 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 NKRFO15226 690 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF862O60290 1169 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 TM7SF2O76062 418 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 TNFAIP8O95379 198 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ZBED1O96006 694 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 GOLGA8HP0CJ92 632 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 CREB1P16220 341 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ARFIP2P53365 341 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 HDAC4P56524 1084 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 PTK6Q13882 451 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 KRT81Q14533 505 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 PDK3Q15120 406 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 TMED2Q15363 201 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 INF2Q27J81 1249 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 FAM26FQ5R3K3 315 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 MFSD4BQ5TF39 518 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 KLHDC10Q6PID8 442 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 RHBDF2Q6PJF5 856 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 DHRS4L2Q6PKH6 230 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ALLCQ8N6M5 410 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 MAGEB6Q8N7X4 407 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ICA1LQ8NDH6 482 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 DENND1AQ8TEH3 1009 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 FAM172AQ8WUF8 416 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 LRRC19Q9H756 370 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 EURLQ9NYK6 297 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ASIC3Q9UHC3 531 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF180Q9UJW8 692 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 EFR3BQ9Y2G0 817 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 NR2E1Q9Y466 385 aa8.58□□□□□ -1.04
ATG4A-201ENST00000343524 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ROBO3Q96MS0 1386 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 C15orf38-AP3S2A0A0A6YYH1 394 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 CFAP69A5D8W1 941 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 MYMKA6NI61 221 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 M0R2N6 131 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 VILLO15195 856 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TM9SF1O15321 606 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 SLC26A4O43511 780 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ZBED4O75132 1171 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TRMUO75648 421 aaKnown RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ITGBL1O95965 494 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 IL1BP01584 269 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 PYGMP11217 842 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ATF2P15336 505 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 HALP42357 657 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 VPS41P49754 854 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 BCAMP50895 628 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 JAM2P57087 298 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 PPIDQ08752 370 aaKnown RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 KIF22Q14807 665 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 DEFB115Q30KQ5 88 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 KLHL35Q6PF15 583 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ANO5Q75V66 913 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ARPINQ7Z6K5 226 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ERI1Q8IV48 349 aaKnown RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 MARVELD2Q8N4S9 558 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 SAMD3Q8N6K7 520 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 RAD54LQ92698 747 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 SKA1Q96BD8 255 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-201ENST00000343524 SNX27Q96L92 541 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TRABDQ9H4I3 376 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 EBF3Q9H4W6 596 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 NPHS2Q9NP85 383 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 INIPQ9NRY2 104 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TBC1D23Q9NUY8 699 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TAS2R1Q9NYW7 299 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 NINJ2Q9NZG7 142 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 UVRAGQ9P2Y5 699 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 POLIQ9UNA4 740 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 TACC3Q9Y6A5 838 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 FAM205AQ6ZU69 1335 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 KDM3AQ9Y4C1 1321 aa8.57□□□□□ -1.04
ATG4A-201ENST00000343524 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SPECC1L-ADORA2AF8WAN1 911 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 BAG2O95816 211 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ALDH2P05091 517 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 VCLP18206 1134 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 RFX1P22670 979 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 CA4P22748 312 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 GRIA2P42262 883 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 HSPA13P48723 471 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 TMED10P49755 219 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms