RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 TRPC3Q13507 836 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TCERG1LQ5VWI1 586 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 KRT39Q6A163 491 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 PDE12Q6L8Q7 609 aaKnown RBP20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TRAPPC11Q7Z392 1133 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TRIM59Q8IWR1 403 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 GPR65Q8IYL9 337 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 MTMR12Q9C0I1 747 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 CXCL16Q9H2A7 254 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TSPY26PQ9H489 355 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TUBGCP4Q9UGJ1 667 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 SSX2IPQ9Y2D8 614 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 NUB1Q9Y5A7 615 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDHR4-201ENST00000343366 SF3B1O75533 1304 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDHR4-201ENST00000343366 MYO10Q9HD67 2058 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 FGF18O76093 207 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 RBM10P98175 930 aaKnown RBP20.14■□□□□ 0.81
CDHR4-201ENST00000343366 BIRC3Q13489 604 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 ZACNQ401N2 412 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 SV2CQ496J9 727 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 DCAF17Q5H9S7 520 aaPredicted RBP20.14■□□□□ 0.81
CDHR4-201ENST00000343366 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 PDXDC1Q6P996 788 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 DDX53Q86TM3 631 aaKnown RBP20.14■□□□□ 0.81
CDHR4-201ENST00000343366 C1orf127Q8N9H9 656 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 CCDC150Q8NCX0 1101 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 FAM200AQ8TCP9 573 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 TAF4BQ92750 862 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 SLC35C1Q96A29 364 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 IMPG2Q9BZV3 1241 aa20.14■□□□□ 0.81
CDHR4-201ENST00000343366 STAU1O95793 577 aaKnown RBP20.13■□□□□ 0.81
CDHR4-201ENST00000343366 C4BPAP04003 597 aaKnown RBP20.13■□□□□ 0.81
CDHR4-201ENST00000343366 ITGB3P05106 788 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 MTIF2P46199 727 aaKnown RBP20.13■□□□□ 0.81
CDHR4-201ENST00000343366 TAF6P49848 677 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 WNT7BP56706 349 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 FOXK2Q01167 660 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 PTPN21Q16825 1174 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 TMEM184AQ6ZMB5 413 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 SV2AQ7L0J3 742 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 OR5B17Q8NGF7 314 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 PLEKHO2Q8TD55 490 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 FAXDC2Q96IV6 333 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 GZF1Q9H116 711 aaPredicted RBP20.13■□□□□ 0.81
CDHR4-201ENST00000343366 S1PR5Q9H228 398 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
CDHR4-201ENST00000343366 PRG3Q9Y2Y8 225 aaPredicted RBP20.13■□□□□ 0.81
CDHR4-201ENST00000343366 KCNJ18B7U540 433 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 GOLGA6L19H0YKK7 550 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 KRT19P08727 400 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 CDK11BP21127 795 aaKnown RBP20.12■□□□□ 0.81
CDHR4-201ENST00000343366 MXI1P50539 228 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 NUBP1P53384 320 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 DLG4P78352 724 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 KCNJ12Q14500 433 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 MAN2A1Q16706 1144 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 DUSP6Q16828 381 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 SGSM1Q2NKQ1 1148 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 TCP11X2Q5H9J9 407 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 CDKAL1Q5VV42 579 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 C15orf39Q6ZRI6 1047 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
CDHR4-201ENST00000343366 IRF2BP1Q8IU81 584 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 CREBRFQ8IUR6 639 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 ZNF516Q92618 1163 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 IRF2BPLQ9H1B7 796 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 HCSTQ9UBK5 93 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 AGAP1Q9UPQ3 857 aa20.12■□□□□ 0.81
CDHR4-201ENST00000343366 PTPRJQ12913 1337 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 NT5C1B-RDH14C9J2C7 533 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 FSCN2O14926 492 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 SYN3O14994 580 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 B4GALT3O60512 393 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 KIF4AO95239 1232 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 AFPP02771 609 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 P4HA1P13674 534 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 POLR2BP30876 1174 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 AARSP49588 968 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 LILRA4P59901 499 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 KCNH2Q12809 1159 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 USP41Q3LFD5 358 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 TDRD10Q5VZ19 366 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 LMBRD2Q68DH5 695 aaPredicted RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 FUT10Q6P4F1 479 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 DHX40Q8IX18 779 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 FBXL13Q8NEE6 735 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 APPL2Q8NEU8 664 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 SPATA18Q8TC71 538 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 SUSD3Q96L08 255 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 TUBGCP2Q9BSJ2 902 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 VRTNQ9H8Y1 702 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 NGRNQ9NPE2 291 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 SAMSN1Q9NSI8 373 aaKnown RBP20.11■□□□□ 0.81
CDHR4-201ENST00000343366 FANCLQ9NW38 375 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 MARCH5Q9NX47 278 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 DSEQ9UL01 958 aa20.11■□□□□ 0.81
CDHR4-201ENST00000343366 COQ4Q9Y3A0 265 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms