RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 AGGF1Q8N302 714 aaeCLIP7.56□□□□□ -1.2
VCAN-202ENST00000342785 RIBC1Q8N443 379 aaPredicted RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 FAM71DQ8N9W8 422 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 RANBP17Q9H2T7 1088 aaKnown RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 KCTD10Q9H3F6 313 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 FAM96AQ9H5X1 160 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 SMYD3Q9H7B4 428 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 FNDC3AQ9Y2H6 1198 aaKnown RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 GOLGA8QA0A0J9YX86 632 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 GOLGA8OA6NCC3 632 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 GOLGA8NF8WBI6 632 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
VCAN-202ENST00000342785 POLE2P56282 527 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 ART3Q13508 389 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 SLC15A2Q16348 729 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 CCDC124Q96CT7 223 aaKnown RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 MMP19Q99542 508 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 AGO4Q9HCK5 861 aaKnown RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 MARCOQ9UEW3 520 aaPredicted RBP7.56□□□□□ -1.2
VCAN-202ENST00000342785 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
VCAN-202ENST00000342785 C3P01024 1663 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 MRC1P22897 1456 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ASAP2O43150 1006 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CCDC22O60826 627 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PSMD10O75832 226 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PDHA1P08559 390 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 SPATA31C1P0DKV0 1188 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 VCAM1P19320 739 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CYP3A7P24462 503 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CCNG2Q16589 344 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 LVRNQ6Q4G3 990 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 IRF2BP2Q7Z5L9 587 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 EIF1ADQ8N9N8 165 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 CHST13Q8NET6 341 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 GSDMBQ8TAX9 411 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 FGFBP2Q9BYJ0 223 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PRMT7Q9NVM4 692 aaPredicted RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 TAS2R14Q9NYV8 317 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 WHRNQ9P202 907 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 KPNA7A9QM74 516 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PSTPIP1O43586 416 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ZFXP17010 805 aaPredicted RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 RPL21P46778 160 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 BACE1P56817 501 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 COPS2P61201 443 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 IFI35P80217 286 aaPredicted RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 GCNT1Q02742 428 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 KDSRQ06136 332 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PTK7Q13308 1070 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PRPF31Q8WWY3 499 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 ELP3Q9H9T3 547 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ASTN1O14525 1302 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 SMAPO00193 183 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PFDN6O15212 129 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PGM1P36871 562 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 AP1B1Q10567 949 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 TMEM132DQ14C87 1099 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 BOLA3Q53S33 107 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 RABGAP1LQ5R372 815 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 MCOLN2Q8IZK6 566 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 IQCKQ8N0W5 287 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CEP120Q8N960 986 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ACTL9Q8TC94 416 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 EPS8L1Q8TE68 723 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PGM2Q96G03 612 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 SERPINI1Q99574 410 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 NT5C1AQ9BXI3 368 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 DNAJC5Q9H3Z4 198 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 EPS15L1Q9UBC2 864 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 TGFB1I1O43294 461 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 MAPTP10636 758 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 STIP1P31948 543 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 MCL1Q07820 350 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PPIL6Q8IXY8 311 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ABRAQ8N0Z2 381 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 RYBPQ8N488 228 aaPredicted RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 SPIRE2Q8WWL2 714 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 LRGUKQ96M69 825 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 TRIM4Q9C037 500 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 VCX3AQ9NNX9 186 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PAK5Q9P286 719 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 PCDHAC2Q9Y5I4 1007 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 SNRPAP09012 282 aaKnown RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 SUPT20HL2P0C7V6 817 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 TCF7P36402 384 aaPredicted RBP7.55□□□□□ -1.2
VCAN-202ENST00000342785 SCTRP47872 440 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 NME3Q13232 169 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 CLEC16AQ2KHT3 1053 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
VCAN-202ENST00000342785 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms