RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CALML6Q8TD86 181 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 MAP3K14Q99558 947 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 MEFVO15553 781 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ARIH2O95376 493 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 FGFR4P22455 802 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 BACE1P56817 501 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ABCE1P61221 599 aaKnown RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 FBXO38Q6PIJ6 1188 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 OLFML3Q9NRN5 406 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 CD274Q9NZQ7 290 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 PRR23AA6NEV1 266 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 CHUKO15111 745 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ANGPT2O15123 496 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 EFCAB14O75071 495 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 PGK2P07205 417 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 RFWD2Q8NHY2 731 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 SEPT8Q92599 483 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 STARD7Q9NQZ5 370 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 TTLL13PA6NNM8 815 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 CCDC22O60826 627 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 SUPT20HL2P0C7V6 817 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 SLC2A3P11169 496 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 PRKCQQ04759 706 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 DPYDQ12882 1025 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF177Q13360 481 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 C6orf10Q5SRN2 563 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ST13P4Q8IZP2 240 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 CPA4Q9UI42 421 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ATP1A1P05023 1023 aaKnown RBP15.71■□□□□ 0.1
UBE3B-202ENST00000342494 URODP06132 367 aa15.71■□□□□ 0.1
UBE3B-202ENST00000342494 SFSWAPQ12872 951 aaKnown RBP15.71■□□□□ 0.1
UBE3B-202ENST00000342494 ZRANB3Q5FWF4 1079 aa15.71■□□□□ 0.1
UBE3B-202ENST00000342494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.1
UBE3B-202ENST00000342494 CINPQ9BW66 212 aaPredicted RBP15.71■□□□□ 0.1
UBE3B-202ENST00000342494 XPO7Q9UIA9 1087 aaKnown RBP15.71■□□□□ 0.1
UBE3B-202ENST00000342494 HLA-DPA1P20036 260 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 LRRC74AQ0VAA2 488 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 ACER1Q8TDN7 264 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 COG1Q8WTW3 980 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 PI4K2AQ9BTU6 479 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 RSAD1Q9HA92 442 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 FHOD1Q9Y613 1164 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 FOXP2O15409 715 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 FLOT2Q14254 428 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 KIF2CQ99661 725 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 FAM129AQ9BZQ8 928 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 C17orf75Q9HAS0 396 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 C20orf96Q9NUD7 363 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-202ENST00000342494 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 PPP1R36Q96LQ0 422 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
UBE3B-202ENST00000342494 PSD3Q9NYI0 1048 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 CRLS1Q9UJA2 301 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 TARSL2A2RTX5 802 aaKnown RBP15.7■□□□□ 0.1
UBE3B-202ENST00000342494 GOLGA8RI6L899 631 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 ZC3H11AO75152 810 aaKnown RBP eCLIP15.7■□□□□ 0.1
UBE3B-202ENST00000342494 PNMA6AP0CW24 399 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-202ENST00000342494 CYP11B2P19099 503 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 PPP4CP60510 307 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 CCDC157Q569K6 752 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 MKNK1Q9BUB5 465 aa15.7■□□□□ 0.1
UBE3B-202ENST00000342494 CKMP06732 381 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 SRGNP10124 158 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 AMHR2Q16671 573 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 FBXO16Q8IX29 292 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 SPATA18Q8TC71 538 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 METTL5Q9NRN9 209 aaKnown RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 SLC25A13Q9UJS0 675 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 TBX20Q9UMR3 447 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 MTSS1O43312 755 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 EGFRP00533 1210 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 MBL2P11226 248 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 BRD2P25440 801 aaKnown RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 EPHB2P29323 1055 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CATSPER3Q86XQ3 398 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 FAM161BQ96MY7 647 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 RPRD1AQ96P16 312 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 WWP1Q9H0M0 922 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 PAK5Q9P286 719 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 LRRC7Q96NW7 1537 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 TECPR2O15040 1411 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 SUPT3HB4E1H0 165 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CHGBP05060 677 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 GYS1P13807 737 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 APOL5Q9BWW9 433 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 P4HA2O15460 535 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CHRM3P20309 590 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 ACO1P21399 889 aaKnown RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CLCN3P51790 818 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 POLD3Q15054 466 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-202ENST00000342494 RBM15Q96T37 977 aaKnown RBP eCLIP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms