RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RBAKQ9NYW8 714 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-201ENST00000341472 KIAA0391O15091 583 aaKnown RBP21.78■■□□□ 1.08
SYNE2-201ENST00000341472 MICAL2O94851 1124 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 CYP11A1P05108 521 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 GPC5P78333 572 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 SLC5A9Q2M3M2 681 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 RESP18Q5W5W9 173 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 PDZD4Q76G19 769 aaPredicted RBP21.78■■□□□ 1.08
SYNE2-201ENST00000341472 THEM5Q8N1Q8 247 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 GPR152Q8TDT2 470 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 NOC3LQ8WTT2 800 aaKnown RBP21.78■■□□□ 1.08
SYNE2-201ENST00000341472 CA14Q9ULX7 337 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 TRIP11Q15643 1979 aa21.78■■□□□ 1.08
SYNE2-201ENST00000341472 KRBA1A5PL33 1030 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 GALR2O43603 387 aaPredicted RBP21.77■■□□□ 1.08
SYNE2-201ENST00000341472 RFX1P22670 979 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 PLD1Q13393 1074 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 PRSS36Q5K4E3 855 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 CENPPQ6IPU0 288 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 ALYREFQ86V81 257 aaKnown RBP21.77■■□□□ 1.08
SYNE2-201ENST00000341472 ATAD1Q8NBU5 361 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 LEMD2Q8NC56 503 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 GLIS3Q8NEA6 775 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 ZNF507Q8TCN5 953 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 BORCS6Q96GS4 357 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 RTP3Q9BQQ7 232 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 PYM1Q9BRP8 204 aaKnown RBP21.77■■□□□ 1.08
SYNE2-201ENST00000341472 CEP72Q9P209 647 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 SLC27A5Q9Y2P5 690 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 MYH11P35749 1972 aa21.77■■□□□ 1.08
SYNE2-201ENST00000341472 VWA8A3KMH1 1905 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 CACNA1HO95180 2353 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 KPNA7A9QM74 516 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 PI15O43692 258 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 VNN2O95498 520 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 CEBPBP17676 345 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 AOC1P19801 751 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 PNPLA4P41247 253 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 ALDH1A3P47895 512 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 EPHB3P54753 998 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 WNT7BP56706 349 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 SV2CQ496J9 727 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 FAM26FQ5R3K3 315 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 WSCD1Q658N2 575 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 CWF19L1Q69YN2 538 aaKnown RBP21.76■■□□□ 1.07
SYNE2-201ENST00000341472 HS6ST3Q8IZP7 471 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 GPD1LQ8N335 351 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 TCEAL4Q96EI5 215 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 KXD1Q9BQD3 176 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 AGAP1Q9UPQ3 857 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 YIPF1Q9Y548 306 aa21.76■■□□□ 1.07
SYNE2-201ENST00000341472 MTCL1Q9Y4B5 1905 aaKnown RBP21.75■■□□□ 1.07
SYNE2-201ENST00000341472 ZNF233A6NK53 670 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 EIF3DO15371 548 aaKnown RBP eCLIP21.75■■□□□ 1.07
SYNE2-201ENST00000341472 MYL4P12829 197 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 UNC13DQ70J99 1090 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 CSGALNACT2Q8N6G5 542 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 ZNF560Q96MR9 790 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 TMEM209Q96SK2 561 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 BLZF1Q9H2G9 400 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 CRISPLD1Q9H336 500 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 PDE11AQ9HCR9 933 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 ASAH2Q9NR71 780 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 CITO14578 2027 aa21.75■■□□□ 1.07
SYNE2-201ENST00000341472 C2orf16Q68DN1 1984 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 ECI2O75521 394 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 POLR2BP30876 1174 aaKnown RBP21.74■■□□□ 1.07
SYNE2-201ENST00000341472 HOXD13P35453 343 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 CCR2P41597 374 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 AFMP43652 599 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 RBP5P82980 135 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 POTEHQ6S545 545 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 EPM2AIP1Q7L775 607 aaPredicted RBP21.74■■□□□ 1.07
SYNE2-201ENST00000341472 CEP57L1Q8IYX8 460 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 OR10T2Q8NGX3 314 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 ATOH1Q92858 354 aaPredicted RBP21.74■■□□□ 1.07
SYNE2-201ENST00000341472 SHDQ96IW2 340 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 ZCWPW1Q9H0M4 648 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 KIAA1586Q9HCI6 787 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 ARHGEF3Q9NR81 526 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 R3HCC1Q9Y3T6 440 aaKnown RBP21.74■■□□□ 1.07
SYNE2-201ENST00000341472 DENND4AQ7Z401 1863 aa21.74■■□□□ 1.07
SYNE2-201ENST00000341472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.73■■□□□ 1.07
SYNE2-201ENST00000341472 PVALEFA0A1B0GWK0 134 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 MTMR11A4FU01 709 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 H0Y858 1186 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 ITGB3P05106 788 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 CASP1P29466 404 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 TUFMP49411 452 aaKnown RBP21.73■■□□□ 1.07
SYNE2-201ENST00000341472 EPHA5P54756 1037 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 PFKPQ01813 784 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 SURF1Q15526 300 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 SLC39A12Q504Y0 691 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 TANGO2Q6ICL3 276 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 PHLDB3Q6NSJ2 640 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 C1orf127Q8N9H9 656 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 TBC1D17Q9HA65 648 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 HSPBP1Q9NZL4 362 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 HSFX1Q9UBD0 423 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 ITGA11Q9UKX5 1188 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms