RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SPTLC1O15269 473 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 HUS1O60921 280 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 XYLBO75191 536 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 ZMYND10O75800 440 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 HNRNPA1P09651 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
SYNE4-202ENST00000340477 NFIL3Q16649 462 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 UVSSAQ2YD98 709 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 TPGS2Q68CL5 300 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 THEM5Q8N1Q8 247 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 ZNF461Q8TAF7 563 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 SPATA20Q8TB22 786 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 SLC7A14Q8TBB6 771 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 SMG7Q92540 1137 aaKnown RBP20.67■□□□□ 0.9
SYNE4-202ENST00000340477 ERCC4Q92889 916 aaPredicted RBP20.67■□□□□ 0.9
SYNE4-202ENST00000340477 DMAC2Q9NW81 257 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 C2orf16Q68DN1 1984 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 PHACTR2O75167 634 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 RFPL2O75678 378 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 CYP11A1P05108 521 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 WEE2P0C1S8 567 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 KRT13P13646 458 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 HOXA9P31269 272 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 TRPC3Q13507 836 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 EDRF1Q3B7T1 1238 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 COBLL1Q53SF7 1204 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 RSPO2Q6UXX9 243 aaPredicted RBP20.66■□□□□ 0.9
SYNE4-202ENST00000340477 OR5B17Q8NGF7 314 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 RPGRIP1Q96KN7 1286 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 RHOBTB2Q9BYZ6 727 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 MAFFQ9ULX9 164 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 PTPRJQ12913 1337 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 VCANP13611 3396 aa20.66■□□□□ 0.9
SYNE4-202ENST00000340477 DENND4AQ7Z401 1863 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 PSMA7O14818 248 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 MAPK13O15264 365 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 TBC1D4O60343 1298 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 ADAM9Q13443 819 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 BIRC3Q13489 604 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 TRAPPC11Q7Z392 1133 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 HPDLQ96IR7 371 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 PRKD2Q9BZL6 878 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 POMKQ9H5K3 350 aa20.65■□□□□ 0.9
SYNE4-202ENST00000340477 AFF4Q9UHB7 1163 aaKnown RBP20.65■□□□□ 0.9
SYNE4-202ENST00000340477 WDR27A2RRH5 827 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 CETN3O15182 167 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 LRG1P02750 347 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 ATF2P15336 505 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 PSMC2P35998 433 aaKnown RBP20.64■□□□□ 0.89
SYNE4-202ENST00000340477 PRCPP42785 496 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 CLEC17AQ6ZS10 378 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 INTS8Q75QN2 995 aaKnown RBP20.64■□□□□ 0.89
SYNE4-202ENST00000340477 FAM186BQ8IYM0 893 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 TMEM86AQ8N2M4 240 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 TDRD5Q8NAT2 981 aaKnown RBP20.64■□□□□ 0.89
SYNE4-202ENST00000340477 CYP4F11Q9HBI6 524 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 SIX4Q9UIU6 781 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 CDH22Q9UJ99 828 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 MAN1B1Q9UKM7 699 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 SNX9Q9Y5X1 595 aa20.64■□□□□ 0.89
SYNE4-202ENST00000340477 CLUHO75153 1309 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 C19orf67A6NJJ6 358 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 ABLIM3O94929 683 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 EPB41P11171 864 aaKnown RBP20.63■□□□□ 0.89
SYNE4-202ENST00000340477 CASP4P49662 377 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 MYL7Q01449 175 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 LRRC63Q05C16 580 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 WSCD1Q658N2 575 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 ELMOD1Q8N336 334 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 TOP6BLQ8N6T0 577 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 SPATA18Q8TC71 538 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 TMC2Q8TDI7 906 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 PARD3BQ8TEW8 1205 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 ACSF2Q96CM8 615 aaPredicted RBP20.63■□□□□ 0.89
SYNE4-202ENST00000340477 FAM84AQ96KN4 292 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 GDAP2Q9NXN4 497 aa20.63■□□□□ 0.89
SYNE4-202ENST00000340477 LRRIQ3A6PVS8 624 aaPredicted RBP20.62■□□□□ 0.89
SYNE4-202ENST00000340477 POU2F2P09086 479 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 SP100P23497 879 aaPredicted RBP20.62■□□□□ 0.89
SYNE4-202ENST00000340477 TNNC1P63316 161 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 TSPY1Q01534 308 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 ADCY1Q08828 1119 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 PLD1Q13393 1074 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 ZCWPW2Q504Y3 356 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 ISM2Q6H9L7 571 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 OTOP3Q7RTS5 596 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 TCEAL8Q8IYN2 117 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 ADSSL1Q8N142 457 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 SYAP1Q96A49 352 aaPredicted RBP20.62■□□□□ 0.89
SYNE4-202ENST00000340477 DHTKD1Q96HY7 919 aaPredicted RBP20.62■□□□□ 0.89
SYNE4-202ENST00000340477 BDP1A6H8Y1 2624 aa20.62■□□□□ 0.89
SYNE4-202ENST00000340477 LOC730098B7Z3J9 87 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 BIN1O00499 593 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 CCL16O15467 120 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 PAPLNO95428 1278 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 ATICP31939 592 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 VAMP7P51809 220 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 ENPEPQ07075 957 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 SMARCB1Q12824 385 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms