RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 GBP7Q8N8V2 638 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 PDCD2LQ9BRP1 358 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 CCDC134Q9H6E4 229 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 RAD23BP54727 409 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 ZNF268Q14587 947 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-201ENST00000340437 MTFR1Q15390 333 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 OR5B17Q8NGF7 314 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 ASNSP08243 561 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 ALDH3A1P30838 453 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 GTF2H1P32780 548 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 CCNG2Q16589 344 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 DEPTORQ8TB45 409 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 LRRN4Q8WUT4 740 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
CPSF7-201ENST00000340437 APOBEC3GQ9HC16 384 aaKnown RBP15.21■□□□□ 0.03
CPSF7-201ENST00000340437 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
CPSF7-201ENST00000340437 ZBTB7AO95365 584 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 MAP3K6O95382 1288 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 GCKP35557 465 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 SLC1A1P43005 524 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 HSD17B4P51659 736 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 SMAD1Q15797 465 aaKnown RBP15.21■□□□□ 0.02
CPSF7-201ENST00000340437 DNAJC24Q6P3W2 148 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.02
CPSF7-201ENST00000340437 GINM1Q9NU53 330 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 NXF1Q9UBU9 619 aaKnown RBP15.21■□□□□ 0.02
CPSF7-201ENST00000340437 KAT6AQ92794 2004 aa15.21■□□□□ 0.02
CPSF7-201ENST00000340437 CFAP69A5D8W1 941 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 K7ERI5 159 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 PEX10O60683 326 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 MAPTP10636 758 aaKnown RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 PRKCEQ02156 737 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TFDP1Q14186 410 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TNFAIP8L3Q5GJ75 292 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TMEM63BQ5T3F8 832 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 C12orf56Q8IXR9 622 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 ZNF570Q96NI8 536 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 RNF146Q9NTX7 359 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 DONSONQ9NYP3 566 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 NUB1Q9Y5A7 615 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 MAPK13O15264 365 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 NR3C2P08235 984 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 CCND1P24385 295 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 BASP1P80723 227 aaKnown RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 CAV1Q03135 178 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 CUL2Q13617 745 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TAF1BQ53T94 588 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 MTDHQ86UE4 582 aaKnown RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 CCDC60Q8IWA6 550 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 PALM2Q8IXS6 379 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TTC8Q8TAM2 541 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 FEZF2Q8TBJ5 459 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 NUDCD1Q96RS6 583 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 SYNCQ9H7C4 482 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 FBXO40Q9UH90 709 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 GRID1Q9ULK0 1009 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 ZMYND8Q9ULU4 1186 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 CHKBQ9Y259 395 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 ENTPD5O75356 428 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 OAS1P00973 400 aaKnown RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 KRT19P08727 400 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 ADRA1DP25100 572 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 JAK3P52333 1124 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 MFSD14AQ96MC6 490 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 IMPG2Q9BZV3 1241 aa15.2■□□□□ 0.02
CPSF7-201ENST00000340437 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-201ENST00000340437 SPATA31A6Q5VVP1 1343 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ZBED4O75132 1171 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 BPIFB4P59827 614 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 KRT76Q01546 638 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 CCDC6Q16204 474 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 GALNTL6Q49A17 601 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ANKRD20A3Q5VUR7 823 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 RSBN1LQ6PCB5 846 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-201ENST00000340437 BBOF1Q8ND07 529 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 MAK16Q9BXY0 300 aaKnown RBP15.19■□□□□ 0.02
CPSF7-201ENST00000340437 TXLNGQ9NUQ3 528 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 PDE4DIPQ5VU43 2346 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 UNC5CO95185 931 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 PTGER2P43116 358 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 CENPCQ03188 943 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 C3orf62Q6ZUJ4 267 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 MON1BQ7L1V2 547 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 TRABD2AQ86V40 505 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
CPSF7-201ENST00000340437 EMC1Q8N766 993 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms