RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 F5H423 210 aaPredicted RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 SMPD1P17405 629 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 RABGAP1LQ5R372 815 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 HDAC11Q96DB2 347 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 PLA2G4CQ9UP65 541 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 SLC12A8A0AV02 714 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 TRIP13Q15645 432 aaPredicted RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 LPPQ93052 612 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 ZCCHC17Q9NP64 241 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 PGRMC1O00264 195 aaKnown RBP13.52□□□□□ -0.24
LIN54-201ENST00000340417 ACLYP53396 1101 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.244e-6■■■□□ 14.8
LIN54-201ENST00000340417 SLC39A12Q504Y0 691 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 ADSSL1Q8N142 457 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 CFAP36Q96G28 342 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 JRKLQ9Y4A0 524 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 P4HA2O15460 535 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 C1QTNF8P60827 252 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 CUL2Q13617 745 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 FBXO46Q6PJ61 603 aaPredicted RBP13.52□□□□□ -0.24
LIN54-201ENST00000340417 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 CALR3Q96L12 384 aaKnown RBP13.52□□□□□ -0.24
LIN54-201ENST00000340417 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.24
LIN54-201ENST00000340417 XPO6Q96QU8 1125 aaKnown RBP13.52□□□□□ -0.24
LIN54-201ENST00000340417 CBWD1Q9BRT8 395 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 STK33Q9BYT3 514 aa13.52□□□□□ -0.24
LIN54-201ENST00000340417 MEIS2O14770 477 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 APOL1O14791 398 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 ACRBPQ8NEB7 543 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 CHST12Q9NRB3 414 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 SPG21Q9NZD8 308 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 NDUFA10O95299 355 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 RAP1GAPP47736 663 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 MMS22LQ6ZRQ5 1243 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 DCLK2Q8N568 766 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 PBKQ96KB5 322 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
LIN54-201ENST00000340417 SOWAHDA6NJG2 315 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 CCND3P30281 292 aaPredicted RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 CDKL3Q8IVW4 592 aaPredicted RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 GUCY2FP51841 1108 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 SLC51AQ86UW1 340 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 RAB42Q8N4Z0 105 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ASB7Q9H672 318 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 KIAA1257Q9ULG3 409 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 TWF1Q12792 350 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 RAB30Q15771 203 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 NTRK3Q16288 839 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ZPBP2Q6X784 338 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ZNF720Q7Z2F6 126 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 ASAH2Q9NR71 780 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 DDIT4Q9NX09 232 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 LACTBL1A8MY62 500 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 EML1O00423 815 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 MAFO75444 373 aaPredicted RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 VIMP08670 466 aaKnown RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 VDRP11473 427 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 PAPOLAP51003 745 aaKnown RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 GFPT1Q06210 699 aaPredicted RBP13.51□□□□□ -0.25
LIN54-201ENST00000340417 KIAA0319LQ8IZA0 1049 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 FBF1Q8TES7 1133 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 FBXO44Q9H4M3 255 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ENC1O14682 589 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ATP2C2O75185 946 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 RTN2O75298 545 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 SH3D19Q5HYK7 790 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 JADE1Q6IE81 842 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 ANKS3Q6ZW76 656 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 PPP1R13BQ96KQ4 1090 aa13.51□□□□□ -0.25
LIN54-201ENST00000340417 COL1A2P08123 1366 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 MFAP3LO75121 409 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 LGR5O75473 907 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 CDC25BP30305 580 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 BCAT1P54687 386 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 POLD3Q15054 466 aaPredicted RBP13.5□□□□□ -0.25
LIN54-201ENST00000340417 RHOT1Q8IXI2 618 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 GPR20Q99678 358 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
LIN54-201ENST00000340417 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms