RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 FAM204AQ9H8W3 233 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SNTG2Q9NY99 539 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SCN1AP35498 2009 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 PI4K2BG5E9Z4 385 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 CCDC188H7C350 402 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 NPTXRO95502 500 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 PSMC4P43686 418 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 DR1Q01658 176 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 TCEAL1Q15170 157 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 FAM182AQ5T1J6 154 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 TXNRD3NBQ6F5E7 133 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 EMBQ6PCB8 327 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 CXorf38Q8TB03 319 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 WNT8AQ9H1J5 351 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 MIF4GDA9UHW6 222 aaKnown RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 GOLGA8SH3BPF8 625 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 TREHO43280 583 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 HOXA11P31270 313 aaPredicted RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 OGDHQ02218 1023 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 MORN1Q5T089 497 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SEL1L2Q5TEA6 688 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 ZMAT2Q96NC0 199 aaKnown RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 LPIN3Q9BQK8 851 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 LOC102724159A0A0B4J2E5 919 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 ZEB2O60315 1214 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 ZNF865P0CJ78 1059 aaPredicted RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 AKAP5P24588 427 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 RWDD2BP57060 319 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 PDE4CQ08493 712 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 GPS2Q13227 327 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 PWP2Q15269 919 aaKnown RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 ZNF667Q5HYK9 610 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 IQSEC1Q6DN90 963 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 PRUNE1Q86TP1 453 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 SH2D3CQ8N5H7 860 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 MCEEQ96PE7 176 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 TTC7AQ9ULT0 858 aaPredicted RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 F8VP50 259 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 HCRTO43612 131 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 MYL3P08590 195 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 ADCY2Q08462 1091 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 SIX1Q15475 284 aaPredicted RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 CHST7Q9NS84 486 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 KLK14Q9P0G3 267 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 R3HDM2Q9Y2K5 976 aaKnown RBP16.43■□□□□ 0.22
MBD1-203ENST00000339998 CITO14578 2027 aa16.43■□□□□ 0.22
MBD1-203ENST00000339998 MYADML2A6NDP7 307 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 TNFRSF8P28908 595 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 LMAN1P49257 510 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 JAMLQ86YT9 394 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 WHAMMQ8TF30 809 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 C18orf25Q96B23 403 aaPredicted RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 CCDC66A2RUB6 948 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 CYP2C9P11712 490 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 MMP8P22894 467 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
MBD1-203ENST00000339998 DMTNQ08495 405 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 TTC19Q6DKK2 380 aaPredicted RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 CCDC137Q6PK04 289 aaKnown RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 FAM81BQ96LP2 452 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
MBD1-203ENST00000339998 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
MBD1-203ENST00000339998 MCF2P10911 925 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 AP3M2P53677 418 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 RAD23BP54727 409 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 PLTPP55058 493 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 UAP1Q16222 522 aaPredicted RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 MAATS1Q7Z4T9 603 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 EMC1Q8N766 993 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 ACAP3Q96P50 834 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms