RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PCSK7Q16549 785 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 TSPAN17Q96FV3 270 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 OSBPL8Q9BZF1 889 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 FAM49AQ9H0Q0 323 aaPredicted RBP13.39□□□□□ -0.27
USP47-202ENST00000339865 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 AKR1B1P15121 316 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 ATP6V1B2P21281 511 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 BCAMP50895 628 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 CTSWP56202 376 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 MCCD1P59942 119 aaPredicted RBP13.39□□□□□ -0.27
USP47-202ENST00000339865 P3H1Q32P28 736 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 RHOT1Q8IXI2 618 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
USP47-202ENST00000339865 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
USP47-202ENST00000339865 PSMB9P28065 219 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 DDR2Q16832 855 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 KIRREL3Q8IZU9 778 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 SPATA4Q8NEY3 305 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 SCFD2Q8WU76 684 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
USP47-202ENST00000339865 KIF14Q15058 1648 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 24.4
USP47-202ENST00000339865 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 TRAF2Q12933 501 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 POMGNT2Q8NAT1 580 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
USP47-202ENST00000339865 LSM1O15116 133 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 A1BGP04217 495 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 LCP1P13796 627 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 EXO5Q9H790 373 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 TMCC3Q9ULS5 477 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 NOS1P29475 1434 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 F8VZ95 297 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 AHCYL1O43865 530 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 PRR29P0C7W0 189 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 TFE3P19532 575 aaPredicted RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 C21orf59P57076 290 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 SDE2Q6IQ49 451 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 CENPLQ8N0S6 344 aaPredicted RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 SNX13Q9Y5W8 968 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 MEI4A8MW99 385 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 GGPS1O95749 300 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 ATG16L2Q8NAA4 619 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 TRPC4APQ8TEL6 797 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 DKK3Q9UBP4 350 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 E7ENQ6 273 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 M0QYV0 167 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 CACNA2D1P54289 1103 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 PSMC5P62195 406 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 RBBP8Q99708 897 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 TSEN34Q9BSV6 310 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 NDUFA13Q9P0J0 144 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 ZC3H4Q9UPT8 1303 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 PSAPP07602 524 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 CYP2D7A0A087X1C5 515 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 MMP1P03956 469 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 NFICP08651 508 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 MTM1Q13496 603 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 TWF2Q6IBS0 349 aaKnown RBP13.38□□□□□ -0.27
USP47-202ENST00000339865 MNTQ99583 582 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 STAP1Q9ULZ2 295 aa13.38□□□□□ -0.27
USP47-202ENST00000339865 ABCB1P08183 1280 aaPredicted RBP13.37□□□□□ -0.27
USP47-202ENST00000339865 CHI3L2Q15782 390 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 GALNTL6Q49A17 601 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 RGS18Q9NS28 235 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 SSH2Q76I76 1423 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 CDH16O75309 829 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 NOS3P29474 1203 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
USP47-202ENST00000339865 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 PSMC3IPQ9P2W1 217 aaPredicted RBP13.37□□□□□ -0.27
USP47-202ENST00000339865 RPN2P04844 631 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 PTPN7P35236 360 aa13.37□□□□□ -0.27
USP47-202ENST00000339865 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms