RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SPATA18Q8TC71 538 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 HERVK_113Q902F9 699 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ELMO3Q96BJ8 720 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 KCNF1Q9H3M0 494 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ZMYND8Q9ULU4 1186 aaPredicted RBP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 POLIQ9UNA4 740 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TRAPPC3O43617 180 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TACC1O75410 805 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 PDE6CP51160 858 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 PTK2Q05397 1052 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 HGSNATQ68CP4 663 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ZNF280BQ86YH2 543 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM86AQ8N2M4 240 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 SLC9A7Q96T83 725 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 SMYD3Q9H7B4 428 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 RC3H2Q9HBD1 1191 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ARHGAP20Q9P2F6 1191 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 PCDHB4Q9Y5E5 795 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 SPTLC1O15269 473 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 CYP26A1O43174 497 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 DDHD2O94830 711 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 WEE2P0C1S8 567 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 PNMA6AP0CW24 399 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 ODC1P11926 461 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 CD58P19256 250 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 GATMP50440 423 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 ZNF132P52740 706 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 RBBP8NLQ8NC74 664 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 C3orf58Q8NDZ4 430 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 PHOSPHO2Q8TCD6 241 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 ZNF689Q96CS4 500 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 CCDC42Q96M95 316 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 PAAF1Q9BRP4 392 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 NRDE2Q9H7Z3 1164 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 DSEQ9UL01 958 aa15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 BARX2Q9UMQ3 279 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
NIPAL3-202ENST00000339255 CILPO75339 1184 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 ALDH2P05091 517 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 PAEPP09466 180 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 CLCN1P35523 988 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 CYLC1P35663 651 aaPredicted RBP15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 UNC93AQ86WB7 457 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 ZNF677Q86XU0 584 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 EPS8L1Q8TE68 723 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 SENP8Q96LD8 212 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 COLEC11Q9BWP8 271 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 HAUS4Q9H6D7 363 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 NHEJ1Q9H9Q4 299 aaPredicted RBP15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 CACNG4Q9UBN1 327 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
NIPAL3-202ENST00000339255 KIAA1671Q9BY89 1806 aa15.52■□□□□ 0.07
NIPAL3-202ENST00000339255 M0QZQ0 153 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 CYB561D2O14569 222 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 B4GALT3O60512 393 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 KIF4AO95239 1232 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 GJB5O95377 273 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 CYP11B1P15538 503 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 OR1G1P47890 313 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 EPHB4P54760 987 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 ELAVL2Q12926 359 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 DSTYKQ6XUX3 929 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SUSD3Q96L08 255 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 YME1L1Q96TA2 773 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 CHP1Q99653 195 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 DNAJB4Q9UDY4 337 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 L1RE1Q9UN81 338 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 FAN1Q9Y2M0 1017 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SOWAHDA6NJG2 315 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 AKR1B10O60218 316 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 WARSP23381 471 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 EIF4A3P38919 411 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 RAP1GAPP47736 663 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 CDH8P55286 799 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 BTG3Q14201 252 aaPredicted RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 PAN2Q504Q3 1202 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SLC47A2Q86VL8 602 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 PDCL2Q8N4E4 241 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 ZNF830Q96NB3 372 aaPredicted RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 NT5C1AQ9BXI3 368 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SNX25Q9H3E2 840 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 NOCTQ9UK39 431 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 ADAM28Q9UKQ2 775 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 KIAA1257Q9ULG3 409 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 INSL6Q9Y581 213 aa15.51■□□□□ 0.07
NIPAL3-202ENST00000339255 SF3B1O75533 1304 aaKnown RBP eCLIP15.5■□□□□ 0.079e-6■■■■■ 87.9
NIPAL3-202ENST00000339255 VWA8A3KMH1 1905 aa15.5■□□□□ 0.07
NIPAL3-202ENST00000339255 NRP1O14786 923 aa15.5■□□□□ 0.07
NIPAL3-202ENST00000339255 NDUFA10O95299 355 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms