RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PDIK1LQ8N165 341 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CRAMP1Q96RY5 1269 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 MXRA8Q9BRK3 442 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 TSSK1BQ9BXA7 367 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 AAASQ9NRG9 546 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 STOML1Q9UBI4 398 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 TIAM2Q8IVF5 1701 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 CST8O60676 142 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SKIP12755 728 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 KCNA3P22001 575 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SERPINB4P48594 390 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 RNF220Q5VTB9 566 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 TTC16Q8NEE8 873 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 MSTO1Q9BUK6 570 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SYNJ2BP-COX16A0A087WUM0 186 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SPDYE5A6NIY4 337 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 GZMAP12544 262 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 EMC10Q5UCC4 262 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SLC30A9Q6PML9 568 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SH3BP5LQ7L8J4 393 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 FAM71AQ8IYT1 594 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 RBBP8NLQ8NC74 664 aaPredicted RBP14.91□□□□□ -0.02
PCDH8-201ENST00000338862 RNPEPL1Q9HAU8 725 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 PIH1D1Q9NWS0 290 aaKnown RBP14.91□□□□□ -0.02
PCDH8-201ENST00000338862 COX16Q9P0S2 106 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 K7ERI5 159 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 MAP3K7O43318 606 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 ATP9AO75110 1047 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 CALB2P22676 271 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 MGAT5Q09328 741 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 CLEC16AQ2KHT3 1053 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 C1orf146Q5VVC0 180 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 AGGF1Q8N302 714 aaeCLIP14.91□□□□□ -0.02
PCDH8-201ENST00000338862 EFCAB3Q8N7B9 438 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 RFWD2Q8NHY2 731 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 ZNF75CPQ92670 426 aaPredicted RBP14.91□□□□□ -0.02
PCDH8-201ENST00000338862 ATXN7L3BQ96GX2 97 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 TMEM8AQ9HCN3 771 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 SLC17A7Q9P2U7 560 aa14.91□□□□□ -0.02
PCDH8-201ENST00000338862 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 LOC100653049A0A140TA62 436 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 KRT34O76011 436 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 GTF2H1P32780 548 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 BMPR2Q13873 1038 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 BMT2Q1RMZ1 405 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 SNX30Q5VWJ9 437 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 ARMC3Q5W041 872 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 ARID3BQ8IVW6 561 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 TARS2Q9BW92 718 aaKnown RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 DENND2DQ9H6A0 471 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 RBAKQ9NYW8 714 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 PPP1R12AO14974 1030 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 SLC8A3P57103 927 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 PPP6R3Q5H9R7 873 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 LARGE2Q8N3Y3 721 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 FBXO36Q8NEA4 188 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 STK32AQ8WU08 396 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 UCMAQ8WVF2 138 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 ACAP3Q96P50 834 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 C21orf2O43822 256 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 DCCP43146 1447 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 CRELD2Q6UXH1 353 aaPredicted RBP14.9□□□□□ -0.02
PCDH8-201ENST00000338862 OTOAQ7RTW8 1153 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 SP8Q8IXZ3 490 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 GPD1LQ8N335 351 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 MKL1Q969V6 931 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 LRRC19Q9H756 370 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 MANSC1Q9H8J5 431 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 PACSIN3Q9UKS6 424 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
PCDH8-201ENST00000338862 IGLV3-22A0A075B6J6 115 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 IGKV6D-41A0A0C4DH26 115 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 MYL2P10916 166 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 ALDH1B1P30837 517 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 ARL4CP56559 192 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 SATB1Q01826 763 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 SGSM1Q2NKQ1 1148 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 KHDC1Q4VXA5 237 aaKnown RBP14.89□□□□□ -0.03
PCDH8-201ENST00000338862 PRAMEF18Q5VWM3 479 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 DSTYKQ6XUX3 929 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 TTC7BQ86TV6 843 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 GRAMD1AQ96CP6 724 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 SLC9A2Q9UBY0 812 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 COPEO14579 308 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
PCDH8-201ENST00000338862 ATP4AP20648 1035 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 PSEN1P49768 467 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 CAV1Q03135 178 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 DPY19L2P1Q6NXN4 242 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 ZCCHC23Q6ZST2 131 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 BORCS6Q96GS4 357 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 FAXDC2Q96IV6 333 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 CLPTM1LQ96KA5 538 aa14.89□□□□□ -0.03
PCDH8-201ENST00000338862 POLR3FQ9H1D9 316 aaPredicted RBP14.89□□□□□ -0.03
PCDH8-201ENST00000338862 PSMC3IPQ9P2W1 217 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms