RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SIX6OS1Q8N1H7 587 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 C1orf131Q8NDD1 294 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 GMCL1P1Q8NEA9 526 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CFAP61Q8NHU2 1237 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CCHCR1Q8TD31 782 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 AGAP3Q96P47 875 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 LRRC37BQ96QE4 947 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 PCDHGC5Q9Y5F6 944 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 MYH2Q9UKX2 1941 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 C4BP0C0L5 1744 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CFAP69A5D8W1 941 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 DDX3XO00571 662 aaKnown RBP eCLIP6.83□□□□□ -1.321e-12■■■■□ 20.3
HMG20A-201ENST00000336216 PIAS1O75925 651 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 MOCS2O96007 188 aaPredicted RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 FGRP09769 529 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CREB1P16220 341 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ARSEP51690 589 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 SNX16P57768 344 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 JAG1P78504 1218 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 C6orf163Q5TEZ5 329 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 FAXCQ5TGI0 409 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CROCCP2Q86T23 111 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 PDCD7Q8N8D1 485 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 P3H4Q92791 437 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 TTC17Q96AE7 1141 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 PWWP2AQ96N64 755 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 SLC13A1Q9BZW2 595 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 LRRC4CQ9HCJ2 640 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 AGO4Q9HCK5 861 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ARL2BPQ9Y2Y0 163 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 DDX60Q8IY21 1712 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CCL15-CCL14A0A0B4J2E2 113 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 GOLGA8CPA6NN73 597 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 IRF6O14896 467 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 TJP3O95049 919 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 AGTP01019 485 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 KRT16P08779 473 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 RALAP11233 206 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 RAP1GAPP47736 663 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 MARCKSL1P49006 195 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 PDIA2Q13087 525 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CCL15Q16663 113 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 TMEM119Q4V9L6 283 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ERMARDQ5T6L9 678 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 TMEM154Q6P9G4 183 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 EPM2AIP1Q7L775 607 aaPredicted RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 SDCCAG8Q86SQ7 713 aaPredicted RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC125Q86Z20 511 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CD302Q8IX05 232 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ABI1Q8IZP0 508 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 HIPK4Q8NE63 616 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 RBM46Q8TBY0 533 aaKnown RBP6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ACTRT1Q8TDG2 376 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CCT6BQ92526 530 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 FAF2Q96CS3 445 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 CPB2Q96IY4 423 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 KIAA1586Q9HCI6 787 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 ERVK-5Q9HDB9 667 aa6.83□□□□□ -1.32
HMG20A-201ENST00000336216 SLC16A3O15427 465 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MED7O43513 233 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 NOL4O94818 638 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ITGB3P05106 788 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PDGFRAP16234 1089 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CCND1P24385 295 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RPL21P46778 160 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PSEN1P49768 467 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 IRX1P78414 480 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC14Q49A88 953 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 LGSNQ5TDP6 509 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 IZUMO3Q5VZ72 239 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 NXNQ6DKJ4 435 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ZNF662Q6ZS27 426 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 BZW1Q7L1Q6 419 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RHOT1Q8IXI2 618 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MREGQ8N565 214 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PPM1NQ8N819 430 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 KRT35Q92764 455 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ARHGEF26Q96DR7 871 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 C10orf88Q9H8K7 445 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 TXLNGQ9NUQ3 528 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SLC12A6Q9UHW9 1150 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PCDHB2Q9Y5E7 798 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MYH7P12883 1935 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 I3L4J1 428 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PODXLO00592 558 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 OPHN1O60890 802 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 NPTXRO95502 500 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MT-ND3P03897 115 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 OATP04181 439 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ZNF286BP0CG31 522 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 KITP10721 976 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CYP11B1P15538 503 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms