RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TCP11X1B4DZS4 312 aa24.77■■□□□ 1.56
NDEL1-201ENST00000334527 CST3P01034 146 aaPredicted RBP24.77■■□□□ 1.56
NDEL1-201ENST00000334527 RFC5P40937 340 aa24.77■■□□□ 1.56
NDEL1-201ENST00000334527 TNFSF9P41273 254 aa24.77■■□□□ 1.56
NDEL1-201ENST00000334527 HIBCHQ6NVY1 386 aaPredicted RBP24.77■■□□□ 1.56
NDEL1-201ENST00000334527 CYP4X1Q8N118 509 aa24.77■■□□□ 1.56
NDEL1-201ENST00000334527 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
NDEL1-201ENST00000334527 IGKV6D-21A0A0A0MT36 114 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 ADCY3O60266 1144 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 DNAJC8O75937 253 aaPredicted RBP24.76■■□□□ 1.55
NDEL1-201ENST00000334527 CETPP11597 493 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 BRAFP15056 766 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 CYB5D1Q6P9G0 228 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 RCOR2Q8IZ40 523 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 RBM41Q96IZ5 413 aaKnown RBP24.76■■□□□ 1.55
NDEL1-201ENST00000334527 GSTTP1A0A1W2PQM5 241 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 TMEM191CA6NGB0 347 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 LIASO43766 372 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 SNX3O60493 162 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 KRT1P04264 644 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 TMEM191BP0C7N4 346 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 ATF7P17544 494 aaPredicted RBP24.76■■□□□ 1.55
NDEL1-201ENST00000334527 LMNB2Q03252 620 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 ZBTB33Q86T24 672 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 RELL1Q8IUW5 271 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 BRSK2Q8IWQ3 736 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 UBR7Q8N806 425 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 SLITRK1Q96PX8 696 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 PCYT2Q99447 389 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 FGFR1OP2Q9NVK5 253 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 LGALS13Q9UHV8 139 aa24.76■■□□□ 1.55
NDEL1-201ENST00000334527 UBA1P22314 1058 aaKnown RBP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 XRCC4Q13426 336 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 TRPM8Q7Z2W7 1104 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 FAM212AQ96EL1 285 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 MCEEQ96PE7 176 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 RBM15Q96T37 977 aaKnown RBP eCLIP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 CCDC77Q9BR77 488 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 NRBP2Q9NSY0 501 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 DNPEPQ9ULA0 475 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 NAALADL1Q9UQQ1 740 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 CDH16O75309 829 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 ASS1P00966 412 aaKnown RBP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 ZNF252P-AS1Q0IIN9 211 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 MPP2Q14168 576 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 TARBP2Q15633 366 aaKnown RBP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 SWT1Q5T5J6 900 aaKnown RBP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 MFSD7Q6UXD7 560 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 ZCCHC9Q8N567 271 aaKnown RBP24.75■■□□□ 1.55
NDEL1-201ENST00000334527 GDAP1Q8TB36 358 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 KLRG1Q96E93 195 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 SGSM3Q96HU1 749 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 TCHPQ9BT92 498 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 MTMR12Q9C0I1 747 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
NDEL1-201ENST00000334527 GH1P01241 217 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 CALB1P05937 261 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 BRD2P25440 801 aaKnown RBP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 ZNF394Q53GI3 561 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 CYP4F22Q6NT55 531 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 DNAJC24Q6P3W2 148 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 WDR49Q8IV35 697 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 GLIS1Q8NBF1 620 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 SLC16A10Q8TF71 515 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 FHDC1Q9C0D6 1143 aaPredicted RBP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 MAF1Q9H063 256 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 SLC12A4Q9UP95 1085 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 ZNF148Q9UQR1 794 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 IVNS1ABPQ9Y6Y0 642 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 PEX10O60683 326 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 TJP3O95049 919 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 OAS1P00973 400 aaKnown RBP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 MAGEA4P43358 317 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 ALDH5A1P51649 535 aaPredicted RBP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 MYL6P60660 151 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 STAT4Q14765 748 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 ZPBP2Q6X784 338 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 SRRM1Q8IYB3 904 aaKnown RBP24.74■■□□□ 1.55
NDEL1-201ENST00000334527 CHST13Q8NET6 341 aa24.74■■□□□ 1.55
NDEL1-201ENST00000334527 F8VP50 259 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 FARP2O94887 1054 aaPredicted RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 AP3M2P53677 418 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 NUGGCQ68CJ6 796 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 DCUN1D2Q6PH85 259 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 PARP9Q8IXQ6 854 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 CKAP2Q8WWK9 683 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 PRPF31Q8WWY3 499 aaKnown RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 CD248Q9HCU0 757 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 ABCF3Q9NUQ8 709 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 USP15Q9Y4E8 981 aaPredicted RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 LSM8O95777 96 aaKnown RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 GSTA1P08263 222 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 ZSCAN5DPP0CG00 497 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 STAT5BP51692 787 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 EAPPQ56P03 285 aaPredicted RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 APOBEC3FQ8IUX4 373 aaKnown RBP24.73■■□□□ 1.55
NDEL1-201ENST00000334527 CCHCR1Q8TD31 782 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 CISHQ9NSE2 258 aa24.73■■□□□ 1.55
NDEL1-201ENST00000334527 AFG3L2Q9Y4W6 797 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms