RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 LEKR1Q6ZMV7 388 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 MON1BQ7L1V2 547 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 ARMCX2Q7L311 632 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 EEPD1Q7L9B9 569 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 CROCCP2Q86T23 111 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 SLC13A5Q86YT5 568 aaPredicted RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 FBXO16Q8IX29 292 aaPredicted RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 LINC01465Q8N7H1 131 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 ALG3Q92685 438 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 SLCO2A1Q92959 643 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 ANKRD36BP1Q96IX9 119 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 ZIM3Q96PE6 472 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 ERP44Q9BS26 406 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 TCHPQ9BT92 498 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 NIF3L1Q9GZT8 377 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 APOBEC3GQ9HC16 384 aaKnown RBP9.54□□□□□ -0.88
TREM1-202ENST00000334475 PTPRHQ9HD43 1115 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 GOLGA6AQ9NYA3 693 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 AMACRQ9UHK6 382 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 EVPLQ92817 2033 aa9.54□□□□□ -0.88
TREM1-202ENST00000334475 ZSCAN5CA6NGD5 496 aaPredicted RBP9.53□□□□□ -0.88
TREM1-202ENST00000334475 TMEM110-MUSTN1A8MSY1 372 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 MYO1FO00160 1098 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TTI1O43156 1089 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 PROSCO94903 275 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 C22orf31O95567 290 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 LGALS2P05162 132 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 CALB1P05937 261 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 HOXC6P09630 235 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TMEM191BP0C7N4 346 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 MCF2P10911 925 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 ITGA4P13612 1032 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 CDH5P33151 784 aaPredicted RBP9.53□□□□□ -0.88
TREM1-202ENST00000334475 WNT7BP56706 349 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 SKOR1P84550 965 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TAP1Q03518 808 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 DRP2Q13474 957 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TRPC3Q13507 836 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
TREM1-202ENST00000334475 ZNF568Q3ZCX4 644 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 WDR78Q5VTH9 848 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 LMBRD2Q68DH5 695 aaPredicted RBP9.53□□□□□ -0.88
TREM1-202ENST00000334475 DUPD1Q68J44 220 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 PLEKHA7Q6IQ23 1121 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 EFCAB12Q6NXP0 572 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TMEM270Q6UE05 265 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 SYDE1Q6ZW31 735 aaPredicted RBP9.53□□□□□ -0.88
TREM1-202ENST00000334475 NT5DC4Q86YG4 428 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 RHPN2Q8IUC4 686 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 TTC39CQ8N584 583 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 OR5B17Q8NGF7 314 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 PPTC7Q8NI37 304 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 ACP6Q9NPH0 428 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 ANAPC7Q9UJX3 599 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 NUB1Q9Y5A7 615 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 IVNS1ABPQ9Y6Y0 642 aa9.53□□□□□ -0.88
TREM1-202ENST00000334475 ALPK3Q96L96 1907 aa9.52□□□□□ -0.88
TREM1-202ENST00000334475 ESYT3A0FGR9 886 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 GOLGA6L10A6NI86 522 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 CITO14578 2027 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 FSCN2O14926 492 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 THAP12O43422 761 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ZEB2O60315 1214 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 SHOX2O60902 331 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 IVLP07476 585 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 MARK3P27448 753 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 TMOD1P28289 359 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ATICP31939 592 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ACTN2P35609 894 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 CETN2P41208 172 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 PTGIRP43119 386 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 LMAN1P49257 510 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 EIF3BP55884 814 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 MRPS25P82663 173 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 LACTBP83111 547 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 CDC42EP1Q00587 391 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 MBTD1Q05BQ5 628 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ZNF211Q13398 564 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 PTPROQ16827 1216 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 NAA35Q5VZE5 725 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 TAPT1Q6NXT6 567 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 C17orf99Q6UX52 265 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 RUFY4Q6ZNE9 571 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 APBB1IPQ7Z5R6 666 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms