RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 AK5Q9Y6K8 562 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 A0A0A6YYK5 440 aaPredicted RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 MSH4O15457 936 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ATF7P17544 494 aaPredicted RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 PSMC2P35998 433 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 GTF2IP78347 998 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 AP1B1Q10567 949 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 CTC1Q2NKJ3 1217 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 LPCAT4Q643R3 524 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 DUS1LQ6P1R4 473 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ALYREFQ86V81 257 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ARL10Q8N8L6 244 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 CFAP61Q8NHU2 1237 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 BTBD10Q9BSF8 475 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 STARD13Q9Y3M8 1113 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 SYNGAP1Q96PV0 1343 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 H3BRJ5 948 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ATP5HO75947 161 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ATP5DP30049 168 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 SSTR1P30872 391 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ATXN3P54252 364 aaPredicted RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 OCRLQ01968 901 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 KDSRQ06136 332 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 NFIAQ12857 509 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 RAPH1Q70E73 1250 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 SEMA4DQ92854 862 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 AZIN2Q96A70 460 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 FNBP1Q96RU3 617 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PPM1HQ9ULR3 514 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 TRAF3IP3Q9Y228 551 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 COL24A1Q17RW2 1714 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 H0YIN7 160 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF189O75820 626 aaPredicted RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 CFBP00751 764 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 KRT4P19013 534 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 GCAP28676 217 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 SPARCL1Q14515 664 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 EDRF1Q3B7T1 1238 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PPP1R21Q6ZMI0 780 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ZBED8Q8IZ13 594 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 TTC17Q96AE7 1141 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ERLEC1Q96DZ1 483 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 MECRQ9BV79 373 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF711Q9Y462 761 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 E2F8A0AVK6 867 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 CDH16O75309 829 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 HAUS5O94927 633 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 EYA4O95677 639 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 OATP04181 439 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PGM1P36871 562 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 MARSP56192 900 aaKnown RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PLCB3Q01970 1234 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 LSAMPQ13449 338 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 CEP70Q8NHQ1 597 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PYDC1Q8WXC3 89 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF75CPQ92670 426 aaPredicted RBP11.73□□□□□ -0.53
CCDC87-201ENST00000333861 SYNCQ9H7C4 482 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 PDP2Q9P2J9 529 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
CCDC87-201ENST00000333861 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 NCANO14594 1321 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 PDXKO00764 312 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 MAP3K6O95382 1288 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 TOP3BO95985 862 aaKnown RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ENO1P06733 434 aaKnown RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 IVDP26440 423 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ABCD1P33897 745 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 NPEPPSP55786 919 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 LCA5Q86VQ0 697 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 RBM12BQ8IXT5 1001 aaKnown RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 LAMB2P55268 1798 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 FAM237BA0A1B0GVD1 139 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 E5RJQ4 531 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ECE2O60344 883 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 CCDC22O60826 627 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms