RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 EXD1Q8NHP7 514 aa24.96■■□□□ 1.59
TSKU-201ENST00000333090 ZNF75CPQ92670 426 aaPredicted RBP24.96■■□□□ 1.59
TSKU-201ENST00000333090 MAK16Q9BXY0 300 aaKnown RBP24.96■■□□□ 1.59
TSKU-201ENST00000333090 FBXO28Q9NVF7 368 aa24.96■■□□□ 1.59
TSKU-201ENST00000333090 DCTN4Q9UJW0 460 aa24.96■■□□□ 1.59
TSKU-201ENST00000333090 KRT4P19013 534 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 PTPN4P29074 926 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 ALDH1B1P30837 517 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 CYP24A1Q07973 514 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 XKR9Q5GH70 373 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 LIN9Q5TKA1 542 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 LMBRD2Q68DH5 695 aaPredicted RBP24.95■■□□□ 1.59
TSKU-201ENST00000333090 PODNQ7Z5L7 613 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 TMC2Q8TDI7 906 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 CHURC1Q8WUH1 139 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 MASTLQ96GX5 879 aa24.95■■□□□ 1.59
TSKU-201ENST00000333090 LIASO43766 372 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 TYROBPO43914 113 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 APBA3O96018 575 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 DSG3P32926 999 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 NPTX2P47972 431 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 LMNB2Q03252 620 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 NFX1Q12986 1120 aaKnown RBP24.95■■□□□ 1.58
TSKU-201ENST00000333090 FYB2Q5VWT5 728 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 USP37Q86T82 979 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 MAP4K3Q8IVH8 894 aa24.95■■□□□ 1.58
TSKU-201ENST00000333090 SPDYE1Q8NFV5 336 aaPredicted RBP24.95■■□□□ 1.58
TSKU-201ENST00000333090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.95■■□□□ 1.58
TSKU-201ENST00000333090 MARK3P27448 753 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 TSNAXIP1Q2TAA8 658 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 SLC45A4Q5BKX6 768 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 ENOSF1Q7L5Y1 443 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 OGFOD1Q8N543 542 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 DNAJC9Q8WXX5 260 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 PRMT6Q96LA8 375 aaPredicted RBP24.94■■□□□ 1.58
TSKU-201ENST00000333090 MFSD14AQ96MC6 490 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 TRAFD1O14545 582 aaPredicted RBP24.94■■□□□ 1.58
TSKU-201ENST00000333090 TLR3O15455 904 aaKnown RBP24.94■■□□□ 1.58
TSKU-201ENST00000333090 NOP14P78316 857 aaKnown RBP24.94■■□□□ 1.58
TSKU-201ENST00000333090 MAMLD1Q13495 774 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 MUM1Q2TAK8 710 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 PLEKHG4Q58EX7 1191 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 COL20A1Q9P218 1284 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 TMX2Q9Y320 296 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 NUMBLQ9Y6R0 609 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 ASTN2O75129 1339 aaPredicted RBP24.94■■□□□ 1.58
TSKU-201ENST00000333090 SCN9AQ15858 1988 aa24.94■■□□□ 1.58
TSKU-201ENST00000333090 CLRN2A0PK11 232 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 BANF1O75531 89 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 PIAS1O75925 651 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 OVGP1Q12889 678 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 DMP1Q13316 513 aaPredicted RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 SLC39A4Q6P5W5 647 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 RFWD3Q6PCD5 774 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 CLNKQ7Z7G1 428 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 CDAN1Q8IWY9 1227 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 HAUS1Q96CS2 278 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 PSMC3IPQ9P2W1 217 aaPredicted RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 GOLGA8SH3BPF8 625 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 GOLGA8MH3BSY2 632 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 C2CD2LO14523 706 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 CYP1A1P04798 512 aaPredicted RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 CETN2P41208 172 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 TUBP50607 506 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 MRPS35P82673 323 aaKnown RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 PDIA2Q13087 525 aaKnown RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 MAPK6Q16659 721 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 APBB1IPQ7Z5R6 666 aaPredicted RBP24.93■■□□□ 1.58
TSKU-201ENST00000333090 ANKMY2Q8IV38 441 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 ZBTB10Q96DT7 871 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 MIPEPQ99797 713 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 FAM213AQ9BRX8 229 aa24.93■■□□□ 1.58
TSKU-201ENST00000333090 TCP10L2B9ZVM9 353 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 TCF4P15884 667 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 ADRA1DP25100 572 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 SEPT7Q16181 437 aaKnown RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 THEMIS2Q5TEJ8 643 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 ZNF677Q86XU0 584 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 MRIQ9BWK5 157 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 DCLRE1BQ9H816 532 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 MRPL47Q9HD33 250 aaKnown RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 CYLDQ9NQC7 956 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 KMT5AQ9NQR1 393 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 LRRD1A4D1F6 860 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 IFNB1P01574 187 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 GTF2H1P32780 548 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 SOX10P56693 466 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 KHDC1Q4VXA5 237 aaKnown RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 LARGE2Q8N3Y3 721 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 AGBL1Q96MI9 1066 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 LBHD1Q9BQE6 289 aaPredicted RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 AGO4Q9HCK5 861 aaKnown RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 NPM3O75607 178 aaKnown RBP24.92■■□□□ 1.58
TSKU-201ENST00000333090 MXRA7P84157 204 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 TKFCQ3LXA3 575 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 SPOPLQ6IQ16 392 aa24.92■■□□□ 1.58
TSKU-201ENST00000333090 HNRNPDLO14979 420 aaKnown RBP24.91■■□□□ 1.58
TSKU-201ENST00000333090 TROVE2P10155 538 aaKnown RBP eCLIP24.91■■□□□ 1.58
TSKU-201ENST00000333090 MCCD1P59942 119 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms