RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CHST7Q9NS84 486 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TUBGCP4Q9UGJ1 667 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 WASF2Q9Y6W5 498 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 SFI1A8K8P3 1242 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TBCAO75347 108 aaKnown RBP19.17■□□□□ 0.66
PKP3-201ENST00000331563 ZWINTO95229 277 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 PSMC2P35998 433 aaKnown RBP19.17■□□□□ 0.66
PKP3-201ENST00000331563 CCNFP41002 786 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 PSMC6P62333 389 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 RHBDF2Q6PJF5 856 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 WDR60Q8WVS4 1066 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 LRRC19Q9H756 370 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 APEX2Q9UBZ4 518 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 ZNF70Q9UC06 446 aaPredicted RBP19.17■□□□□ 0.66
PKP3-201ENST00000331563 SUN2Q9UH99 717 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 CYP1A1P04798 512 aaPredicted RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 SIX1Q15475 284 aaPredicted RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 GPATCH4Q5T3I0 446 aaKnown RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 KBTBD2Q8IY47 623 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 TUBGCP5Q96RT8 1024 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 PLVAPQ9BX97 442 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 PCDH18Q9HCL0 1135 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 ARL8BQ9NVJ2 186 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 STX18Q9P2W9 335 aaKnown RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 GRID1Q9ULK0 1009 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 CHMP2BQ9UQN3 213 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.16■□□□□ 0.66
PKP3-201ENST00000331563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 SMARCA1P28370 1054 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 RTP1P59025 263 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 FKBP1AP62942 108 aaKnown RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 CBWD6Q4V339 395 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 CBWD3Q5JTY5 395 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 CBWD5Q5RIA9 395 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 HP1BP3Q5SSJ5 553 aaPredicted RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 HYIQ5T013 277 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 IZUMO2Q6UXV1 221 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 NSMFQ6X4W1 530 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 RINLQ6ZS11 566 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 P2RX7Q99572 595 aaKnown RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 SYT11Q9BT88 431 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 MIS12Q9H081 205 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 BCAS3Q9H6U6 928 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 ETNK2Q9NVF9 386 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 ATAD5Q96QE3 1844 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 RGPD3A6NKT7 1758 aaPredicted RBP19.16■□□□□ 0.66
PKP3-201ENST00000331563 RGPD4Q7Z3J3 1758 aa19.16■□□□□ 0.66
PKP3-201ENST00000331563 BAG2O95816 211 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 CYP2J2P51589 502 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 CXCL9Q07325 125 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 GSTA3Q16772 222 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 RTKN2Q8IZC4 609 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 GPR88Q9GZN0 384 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 ASCC2Q9H1I8 757 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 SPATA7Q9P0W8 599 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 HEY2Q9UBP5 337 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 ZNF212Q9UDV6 495 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 C2CD2LO14523 706 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 PPP2R5CQ13362 524 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 LIN52Q52LA3 116 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 TMEM179Q6ZVK1 233 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 TRABD2AQ86V40 505 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 SPIRE2Q8WWL2 714 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 NR1H4Q96RI1 486 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 GLIS2Q9BZE0 524 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 KRT82Q9NSB4 513 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 OPHN1O60890 802 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 CAV1Q03135 178 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 SLC1A5Q15758 541 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 PKN2Q16513 984 aaKnown RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 P3H1Q32P28 736 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 CCDC62Q6P9F0 684 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 ZNF564Q8TBZ8 553 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 ZNF75CPQ92670 426 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 NUP85Q9BW27 656 aa19.15■□□□□ 0.66
PKP3-201ENST00000331563 UBE2TQ9NPD8 197 aaPredicted RBP19.15■□□□□ 0.66
PKP3-201ENST00000331563 ASLP04424 464 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 HNRNPCP07910 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
PKP3-201ENST00000331563 ESRRAP11474 423 aaPredicted RBP19.14■□□□□ 0.65
PKP3-201ENST00000331563 HOXA13P31271 388 aaPredicted RBP19.14■□□□□ 0.65
PKP3-201ENST00000331563 MYL7Q01449 175 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 LVRNQ6Q4G3 990 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 MAML1Q92585 1016 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 NSL1Q96IY1 281 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 GMLQ99445 158 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 FAM118BQ9BPY3 351 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 ANGPTL2Q9UKU9 493 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 C10orf71Q711Q0 1435 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 HADHBP55084 474 aaKnown RBP19.14■□□□□ 0.65
PKP3-201ENST00000331563 NR1H3Q13133 447 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 DAB2IPQ5VWQ8 1189 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms