RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 IPMKQ8NFU5 416 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 KLF6Q99612 283 aaPredicted RBP10.68□□□□□ -0.7
CHD3-201ENST00000330494 ZFATQ9P243 1243 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 PRR23AA6NEV1 266 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 F8W8V4 182 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 PHF2O75151 1096 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 PDHA1P08559 390 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 RPS12P25398 132 aaKnown RBP10.68□□□□□ -0.7
CHD3-201ENST00000330494 C10orf120Q5SQS8 335 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 CD4P01730 458 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 MED15Q96RN5 788 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 RIT2Q99578 217 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 CBWD1Q9BRT8 395 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 THAP2Q9H0W7 228 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 UPF3AQ9H1J1 476 aaKnown RBP10.68□□□□□ -0.7
CHD3-201ENST00000330494 DUSP10Q9Y6W6 482 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 MYO5BQ9ULV0 1848 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 NAB2Q15742 525 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 KLHDC7AQ5VTJ3 777 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 LRRC37BQ96QE4 947 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 RAD51CO43502 376 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 IL18RAPO95256 599 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 GFAPP14136 432 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 FBXW4P57775 412 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 ACTN3Q08043 901 aaPredicted RBP10.68□□□□□ -0.7
CHD3-201ENST00000330494 DHX34Q14147 1143 aaKnown RBP10.68□□□□□ -0.7
CHD3-201ENST00000330494 EFTUD2Q15029 972 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHD3-201ENST00000330494 ACOT1Q86TX2 421 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 CYP2W1Q8TAV3 490 aa10.68□□□□□ -0.7
CHD3-201ENST00000330494 SLC1A1P43005 524 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 CXCL9Q07325 125 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PIGHQ14442 188 aaPredicted RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 PDCD2Q16342 344 aaPredicted RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 FAM71DQ8N9W8 422 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PALMDQ9NP74 551 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PXMP2Q9NR77 195 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ADM5C9JUS6 153 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 EIF3DO15371 548 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHD3-201ENST00000330494 ASAP2O43150 1006 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 CYBBP04839 570 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 KLRC1P26715 233 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 MORF4L2Q15014 288 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 SPDYAQ5MJ70 313 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 GRAMD4Q6IC98 578 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ATP6V1G3Q96LB4 118 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 FAM161BQ96MY7 647 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PCMTD2Q9NV79 361 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 AKT1P31749 480 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 MAP1SQ66K74 1059 aaPredicted RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 NLRP14Q86W24 1093 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 DRC3Q9H069 523 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ANGPTL2Q9UKU9 493 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 NEU2Q9Y3R4 380 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 SKIP12755 728 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PON1P27169 355 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ARHGDIAP52565 204 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ARFIP2P53365 341 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 KCNT1Q5JUK3 1230 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 TTC39CQ8N584 583 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ADARB2Q9NS39 739 aaKnown RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHD3-201ENST00000330494 ENDOD1O94919 500 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 GTF2A2P52657 109 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 FCGRTP55899 365 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 FSCBQ5H9T9 825 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 DCUN1D1Q96GG9 259 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 SH3GL3Q99963 347 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 FAM167BQ9BTA0 163 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 TUBB6Q9BUF5 446 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ACTR5Q9H9F9 607 aaPredicted RBP10.67□□□□□ -0.7
CHD3-201ENST00000330494 LCMT1Q9UIC8 334 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 ADGRA2Q96PE1 1338 aa10.67□□□□□ -0.7
CHD3-201ENST00000330494 CST8O60676 142 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 GPD1P21695 349 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 PSMC6P62333 389 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 RBM15Q96T37 977 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD3-201ENST00000330494 YIPF2Q9BWQ6 316 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 SLC7A5P2Q9GIP4 190 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 TRABDQ9H4I3 376 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 C20orf96Q9NUD7 363 aaPredicted RBP10.66□□□□□ -0.7
CHD3-201ENST00000330494 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
CHD3-201ENST00000330494 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 SH3BP1Q9Y3L3 701 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 ALDH1A1P00352 501 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 ENO1P06733 434 aaKnown RBP10.66□□□□□ -0.7
CHD3-201ENST00000330494 KCNA2P16389 499 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 PCYT1AP49585 367 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 ESRRGP62508 458 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 ERLEC1Q96DZ1 483 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 FGFR1OP2Q9NVK5 253 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 PRMT7Q9NVM4 692 aaPredicted RBP10.66□□□□□ -0.7
CHD3-201ENST00000330494 ZNF711Q9Y462 761 aa10.66□□□□□ -0.7
CHD3-201ENST00000330494 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms