RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 AGAP1Q9UPQ3 857 aa20.1■□□□□ 0.81
EXOSC3-201ENST00000327304 XPOTO43592 962 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 ASS1P00966 412 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 CYP3A5P20815 502 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 BMS1Q14692 1282 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 RNF10Q8N5U6 811 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 NT5C1BQ96P26 610 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 SLC38A7Q9NVC3 462 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 WDR5P61964 334 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 NOP14P78316 857 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 DEFB103AP81534 67 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 RBP5P82980 135 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 GRIK3Q13003 919 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 NOMO2Q5JPE7 1267 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 C9orf57Q5W0N0 161 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 OTOP2Q7RTS6 562 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 TRIM58Q8NG06 486 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 KAT5Q92993 513 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 UBE2TQ9NPD8 197 aaPredicted RBP20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 CDC23Q9UJX2 597 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 NUB1Q9Y5A7 615 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 DUSP10Q9Y6W6 482 aa20.09■□□□□ 0.81
EXOSC3-201ENST00000327304 ANO9A1A5B4 782 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 ZC3H11AO75152 810 aaKnown RBP eCLIP20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 CLSTN1O94985 981 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 UPP2O95045 317 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 SGSM1Q2NKQ1 1148 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 ZNF699Q32M78 642 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 WDR44Q5JSH3 913 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 ZNF365Q70YC5 407 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 FAM81BQ96LP2 452 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 CASD1Q96PB1 797 aa20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 TDRD15B5MCY1 1934 aaKnown RBP20.08■□□□□ 0.8
EXOSC3-201ENST00000327304 B4GALT3O60512 393 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 TACC1O75410 805 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 BAIAP3O94812 1187 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 TMCO2Q7Z6W1 182 aaPredicted RBP20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 PPM1KQ8N3J5 372 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 URGCPQ8TCY9 931 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 HPDLQ96IR7 371 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 KREMEN1Q96MU8 473 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 IMPG2Q9BZV3 1241 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 NAGPAQ9UK23 515 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 NENFQ9UMX5 172 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 SCN1AP35498 2009 aa20.07■□□□□ 0.8
EXOSC3-201ENST00000327304 MACROD2A1Z1Q3 448 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 CASTOR2A6NHX0 329 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 BTNL10A8MVZ5 291 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 EFCAB14O75071 495 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 FGBP02675 491 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 AMHP03971 560 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 LRPAP1P30533 357 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 ARHGAP44Q17R89 818 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 TMEM240Q5SV17 173 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 ABI1Q8IZP0 508 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 MNS1Q8NEH6 495 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 ARID3AQ99856 593 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 TBC1D13Q9NVG8 400 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 PIRO00625 290 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 HOXA2O43364 376 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 MFAP3P55082 362 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 ZNF280BQ86YH2 543 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 RABGGTAQ92696 567 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 PAAF1Q9BRP4 392 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 SYT11Q9BT88 431 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 INTUQ9ULD6 942 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 POLIQ9UNA4 740 aa20.06■□□□□ 0.8
EXOSC3-201ENST00000327304 FOXN3O00409 490 aaPredicted RBP20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 PNMA6AP0CW24 399 aaPredicted RBP20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 IGFBP6P24592 240 aaPredicted RBP20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 ATICP31939 592 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 AMPD2Q01433 879 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 TUSC3Q13454 348 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 PAPD7Q5XG87 772 aaKnown RBP20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 ALKBH5Q6P6C2 394 aaKnown RBP20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 ENOSF1Q7L5Y1 443 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 LRRC52Q8N7C0 313 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 SLC30A5Q8TAD4 765 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 TAF4BQ92750 862 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 TOP1MTQ969P6 601 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 ALS2CR12Q96Q35 445 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 CARD6Q9BX69 1037 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 COL4A6Q14031 1691 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 PTPRSQ13332 1948 aa20.05■□□□□ 0.8
EXOSC3-201ENST00000327304 TBKBP1A7MCY6 615 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 ZBBXA8MT70 800 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 EFCAB8A8MWE9 144 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 DDHD2O94830 711 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 STAU1O95793 577 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 CLCNKBP51801 687 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 FAM117BQ6P1L5 589 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 PSRC1Q6PGN9 363 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 SCARA5Q6ZMJ2 495 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 NOX5Q96PH1 765 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 LBHD1Q9BQE6 289 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 NIF3L1Q9GZT8 377 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 VRTNQ9H8Y1 702 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms