RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 NOD2Q9HC29 1040 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 AGO2Q9UKV8 859 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 SNCAIPQ9Y6H5 919 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 PARP14Q460N5 1801 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 UBOX5O94941 541 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 VNN1O95497 513 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 PTPN7P35236 360 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 SOX10P56693 466 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 LLGL1Q15334 1064 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 TRMT1LQ7Z2T5 733 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 FEZF2Q8TBJ5 459 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 NSUN6Q8TEA1 469 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 RXFP1Q9HBX9 757 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 JPH1Q9HDC5 661 aaPredicted RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 DRG1Q9Y295 367 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 CALCAP01258 141 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 GNA15P30679 374 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 STX2P32856 288 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 SKIV2L2P42285 1042 aaKnown RBP21.05■□□□□ 0.96
SOX2-201ENST00000325404 COPS2P61201 443 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 NCALDP61601 193 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 CCDC142Q17RM4 750 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 DLK2Q6UY11 383 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 MGARPQ8TDB4 240 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 MAML1Q92585 1016 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 C11orf70Q9BRQ4 267 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 HEMGNQ9BXL5 484 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 CTNNAL1Q9UBT7 734 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 SLC9A2Q9UBY0 812 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 RIPK3Q9Y572 518 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 CSADQ9Y600 493 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 CLTAP09496 248 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 ALADP13716 330 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 NQO1P15559 274 aaKnown RBP21.05■□□□□ 0.96
SOX2-201ENST00000325404 MAGEA4P43358 317 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 PRKCEQ02156 737 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 RASA2Q15283 850 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 SH3D19Q5HYK7 790 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 CYP4X1Q8N118 509 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 TGS1Q96RS0 853 aaKnown RBP21.05■□□□□ 0.96
SOX2-201ENST00000325404 SEPT9Q9UHD8 586 aaPredicted RBP21.05■□□□□ 0.96
SOX2-201ENST00000325404 ZNF214Q9UL59 606 aaPredicted RBP21.05■□□□□ 0.96
SOX2-201ENST00000325404 PCDHB4Q9Y5E5 795 aa21.05■□□□□ 0.96
SOX2-201ENST00000325404 MAGEB2O15479 319 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 NFX1Q12986 1120 aaKnown RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 MTFR1Q15390 333 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 FAM133BQ5BKY9 247 aaKnown RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 DPY19L2Q6NUT2 758 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 ELMO3Q96BJ8 720 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 CGRRF1Q99675 332 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 AGAP1Q9UPQ3 857 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 DNALI1O14645 258 aaPredicted RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 TLR3O15455 904 aaKnown RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 LIASO43766 372 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 MIS18BP1Q6P0N0 1132 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 PAXIP1Q6ZW49 1069 aaPredicted RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 ANKRD42Q8N9B4 389 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 RBM15Q96T37 977 aaKnown RBP eCLIP21.04■□□□□ 0.96
SOX2-201ENST00000325404 APOBEC3GQ9HC16 384 aaKnown RBP21.04■□□□□ 0.96
SOX2-201ENST00000325404 HOXC10Q9NYD6 342 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 SENP1Q9P0U3 644 aa21.04■□□□□ 0.96
SOX2-201ENST00000325404 RGS20O76081 388 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 ZNF132P52740 706 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 NLRP11P59045 1033 aaKnown RBP21.03■□□□□ 0.96
SOX2-201ENST00000325404 ACTR2P61160 394 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 IRX3P78415 501 aaPredicted RBP21.03■□□□□ 0.96
SOX2-201ENST00000325404 IL9RQ01113 521 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 EAPPQ56P03 285 aaPredicted RBP21.03■□□□□ 0.96
SOX2-201ENST00000325404 RGS9BPQ6ZS82 235 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 TEX13BQ9BXU2 312 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 ECT2Q9H8V3 914 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 RLFQ13129 1914 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 FAM47DPA6NHR8 397 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 ATP2A1O14983 1001 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 TJP3O95049 919 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 CETPP11597 493 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 MMP8P22894 467 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 NAMPTP43490 491 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 AP3M2P53677 418 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 TMEM132BQ14DG7 1078 aa21.03■□□□□ 0.96
SOX2-201ENST00000325404 CCDC60Q8IWA6 550 aaPredicted RBP21.03■□□□□ 0.96
SOX2-201ENST00000325404 RBBP8NLQ8NC74 664 aaPredicted RBP21.03■□□□□ 0.96
SOX2-201ENST00000325404 TMEM191CA6NGB0 347 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 SPATA31C2B4DYI2 1134 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 PRPF4O43172 522 aaKnown RBP eCLIP21.02■□□□□ 0.96
SOX2-201ENST00000325404 LSM8O95777 96 aaKnown RBP21.02■□□□□ 0.96
SOX2-201ENST00000325404 TMEM191BP0C7N4 346 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 EMC2Q15006 297 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 TMEM63BQ5T3F8 832 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 LLGL2Q6P1M3 1020 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 TMEM270Q6UE05 265 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 UBR7Q8N806 425 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 PORCNQ9H237 461 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 RBAKQ9NYW8 714 aaPredicted RBP21.02■□□□□ 0.96
SOX2-201ENST00000325404 KLHL14Q9P2G3 628 aa21.02■□□□□ 0.96
SOX2-201ENST00000325404 CALB1P05937 261 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 SUPT20HL2P0C7V6 817 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 TAC1P20366 129 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 IREB2P48200 963 aaKnown RBP21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms