RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ZNF571Q7Z3V5 609 aaPredicted RBP16.36■□□□□ 0.21
PRPF3-201ENST00000324862 UBR7Q8N806 425 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 LPIN3Q9BQK8 851 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
PRPF3-201ENST00000324862 RFX1P22670 979 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 FECHP22830 423 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
PRPF3-201ENST00000324862 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 PPIGQ13427 754 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■□□□ 12
PRPF3-201ENST00000324862 CCDC142Q17RM4 750 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
PRPF3-201ENST00000324862 TIGD5Q53EQ6 642 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 PALB2Q86YC2 1186 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 TAF4BQ92750 862 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 L1RE1Q9UN81 338 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 CFHP08603 1231 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 BCAR1P56945 870 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
PRPF3-201ENST00000324862 OLIG1Q8TAK6 271 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 WHAMMQ8TF30 809 aa16.35■□□□□ 0.21
PRPF3-201ENST00000324862 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
PRPF3-201ENST00000324862 CHD9Q3L8U1 2897 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 AMHP03971 560 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 LMO2P25791 158 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 ACRBPQ8NEB7 543 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 KBTBD7Q8WVZ9 684 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 ZNF560Q96MR9 790 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 TSPAN18Q96SJ8 248 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 STAU1O95793 577 aaKnown RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 PFKMP08237 780 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 CYP27A1Q02318 531 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 GFPT1Q06210 699 aaPredicted RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 WSCD1Q658N2 575 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 EPS8L1Q8TE68 723 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 SYN2Q92777 582 aaPredicted RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 SENP8Q96LD8 212 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 FAM193BQ96PV7 902 aaPredicted RBP16.34■□□□□ 0.21
PRPF3-201ENST00000324862 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 ELOVL4Q9GZR5 314 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 ADAMTS1Q9UHI8 967 aa16.34■□□□□ 0.21
PRPF3-201ENST00000324862 TDRD15B5MCY1 1934 aaKnown RBP16.33■□□□□ 0.21
PRPF3-201ENST00000324862 LTBP2Q14767 1821 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 CYB561D2O14569 222 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 NRP1O14786 923 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 ZNF263O14978 683 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 CYP11B1P15538 503 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 KCNJ6P48051 423 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 SLC11A1P49279 550 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 C9orf50Q5SZB4 431 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 ENOSF1Q7L5Y1 443 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 B3GALT6Q96L58 329 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 MYO6Q9UM54 1294 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 SERPING1P05155 500 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 FERP16591 822 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 NDST1P52848 882 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 SV2CQ496J9 727 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 OSTM1Q86WC4 334 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
PRPF3-201ENST00000324862 BCL7CQ8WUZ0 217 aaPredicted RBP16.33■□□□□ 0.2
PRPF3-201ENST00000324862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRPF3-201ENST00000324862 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
PRPF3-201ENST00000324862 RC3H2Q9HBD1 1191 aaKnown RBP16.33■□□□□ 0.2
PRPF3-201ENST00000324862 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.2
PRPF3-201ENST00000324862 A0A087X0T9 212 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 USP27XA6NNY8 438 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 CILPO75339 1184 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 MMEP08473 750 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 FAM228BP0C875 321 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 ACAT1P24752 427 aaKnown RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 RPL9P32969 192 aaKnown RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 PNPLA4P41247 253 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 DSTYKQ6XUX3 929 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 DPH6Q7L8W6 267 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 TMTC1Q8IUR5 882 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 LNX1Q8TBB1 728 aaPredicted RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 TFAP2BQ92481 460 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 ZNF689Q96CS4 500 aaPredicted RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 GDAP2Q9NXN4 497 aa16.32■□□□□ 0.2
PRPF3-201ENST00000324862 NOCTQ9UK39 431 aaKnown RBP16.32■□□□□ 0.2
PRPF3-201ENST00000324862 BAIAP3O94812 1187 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 CHRNB2P17787 502 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 BRD2P25440 801 aaKnown RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 PRKCIP41743 596 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 KIF11P52732 1056 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 ZNF132P52740 706 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 RAD23BP54727 409 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms