RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 DNAJC19Q96DA6 116 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 LRRC3Q9BY71 257 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 ZNF292O60281 2723 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 A0A1W2PRU2 124 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 OR6C75A6NL08 312 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 TYMPP19971 482 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ADSSP30520 456 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 LILRA4P59901 499 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 PFKPQ01813 784 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 DUSP4Q13115 394 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 KYAT1Q16773 422 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ADALQ6DHV7 355 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 USP37Q86T82 979 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 C1orf210Q8IVY1 113 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ZSCAN18Q8TBC5 510 aaPredicted RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 HVCN1Q96D96 273 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 SAAL1Q96ER3 474 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 SENP8Q96LD8 212 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 LPIN3Q9BQK8 851 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 SPATA6Q9NWH7 488 aaPredicted RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 AGO2Q9UKV8 859 aaKnown RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 SLC27A5Q9Y2P5 690 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
TPM3-204ENST00000323144 FAM186AA6NE01 2351 aa13.38□□□□□ -0.27
TPM3-204ENST00000323144 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 PIRO00625 290 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 ATF6P18850 670 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 PDCP20941 246 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 SCP2P22307 547 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 CCDC142Q17RM4 750 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 POMGNT1Q8WZA1 660 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 SMARCD2Q92925 531 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 SHDQ96IW2 340 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
TPM3-204ENST00000323144 MKNK1Q9BUB5 465 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
TPM3-204ENST00000323144 DERAQ9Y315 318 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 STYXL1Q9Y6J8 313 aa13.37□□□□□ -0.27
TPM3-204ENST00000323144 FAM170BA6NMN3 283 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 ARNTLO00327 626 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 ZNF197O14709 1029 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 GCNT3O95395 438 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 CYP11A1P05108 521 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 GDI1P31150 447 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 TXLNAP40222 546 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 STAT6P42226 847 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 CYP4F8P98187 520 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 GPR17Q13304 367 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 PLD1Q13393 1074 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 MYBPC2Q14324 1141 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 SLC39A12Q504Y0 691 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
TPM3-204ENST00000323144 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 TSSK4Q6SA08 328 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 ZNF720Q7Z2F6 126 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 GPIHBP1Q8IV16 184 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
TPM3-204ENST00000323144 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
TPM3-204ENST00000323144 CBWD1Q9BRT8 395 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 BCO2Q9BYV7 579 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 BRD9Q9H8M2 597 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
TPM3-204ENST00000323144 ZFP14Q9HCL3 533 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 CCDC39Q9UFE4 941 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
TPM3-204ENST00000323144 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
TPM3-204ENST00000323144 FRMD3A2A2Y4 597 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 HEPACAM2A8MVW5 462 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
TPM3-204ENST00000323144 MICAL2O94851 1124 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 IDEP14735 1019 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
TPM3-204ENST00000323144 SOX9P48436 509 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms