RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 BTAF1O14981 1849 aa18.89■□□□□ 0.62
PRKCB-202ENST00000321728 DDTLA6NHG4 134 aaPredicted RBP18.89■□□□□ 0.62
PRKCB-202ENST00000321728 RXRBP28702 533 aa18.89■□□□□ 0.62
PRKCB-202ENST00000321728 ADSSP30520 456 aa18.89■□□□□ 0.62
PRKCB-202ENST00000321728 KRT39Q6A163 491 aa18.89■□□□□ 0.62
PRKCB-202ENST00000321728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.621e-7■□□□□ 10.7
PRKCB-202ENST00000321728 ALG13Q9NP73 1137 aaKnown RBP18.89■□□□□ 0.62
PRKCB-202ENST00000321728 KLHL11Q9NVR0 708 aa18.89■□□□□ 0.62
PRKCB-202ENST00000321728 DNALI1O14645 258 aaPredicted RBP18.89■□□□□ 0.61
PRKCB-202ENST00000321728 NDUFB10O96000 172 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 ETS1P14921 441 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 ARSEP51690 589 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 GPS1Q13098 491 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 FOXB2Q5VYV0 432 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 RHOT1Q8IXI2 618 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 NSL1Q96IY1 281 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 FAM81BQ96LP2 452 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 TRAPPC9Q96Q05 1148 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 SH2D3AQ9BRG2 576 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 SYNCQ9H7C4 482 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 DBNDD1Q9H9R9 158 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 KANSL3Q9P2N6 904 aa18.89■□□□□ 0.61
PRKCB-202ENST00000321728 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
PRKCB-202ENST00000321728 MAP3K7O43318 606 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 TAS2R40P59535 323 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 NOP14P78316 857 aaKnown RBP18.88■□□□□ 0.61
PRKCB-202ENST00000321728 SIAH1Q8IUQ4 282 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 ZNF398Q8TD17 642 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 TAS1R2Q8TE23 839 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 WDR60Q8WVS4 1066 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 IFT43Q96FT9 208 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 C12orf65Q9H3J6 166 aaKnown RBP18.88■□□□□ 0.61
PRKCB-202ENST00000321728 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 G3V3G9 751 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 PIAS1O75925 651 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 PROSCO94903 275 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 TJP3O95049 919 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 SNRNP35Q16560 246 aaKnown RBP18.88■□□□□ 0.61
PRKCB-202ENST00000321728 DCAF8Q5TAQ9 597 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 RFX8Q6ZV50 586 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 ANKMY2Q8IV38 441 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 GBP5Q96PP8 586 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 TRIM55Q9BYV6 548 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 TOPORSQ9NS56 1045 aaPredicted RBP18.88■□□□□ 0.61
PRKCB-202ENST00000321728 DNPEPQ9ULA0 475 aa18.88■□□□□ 0.61
PRKCB-202ENST00000321728 MAGEA13PA6NCF6 341 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 GOLGA8RI6L899 631 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ARP10275 920 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PDIA2Q13087 525 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 LAMB3Q13751 1172 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PDCD2Q16342 344 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 NBPF20Q3BBV1 942 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 CCNJLQ8IV13 435 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PDCD7Q8N8D1 485 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PTCD3Q96EY7 689 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 TUBB6Q9BUF5 446 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 FBXO6Q9NRD1 293 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 GOLGA8SH3BPF8 625 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 GOLGA8MH3BSY2 632 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 UBTFL6P0CB48 400 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 KRT10P13645 584 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 GYS1P13807 737 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 SERPINB3P29508 390 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ARFIP2P53365 341 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 AP1B1Q10567 949 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 RINLQ6ZS11 566 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 HAUS6Q7Z4H7 955 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 C12orf56Q8IXR9 622 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 KLF6Q99612 283 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 AVENQ9NQS1 362 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 SLC24A2Q9UI40 661 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PI4K2BG5E9Z4 385 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PSTPIP1O43586 416 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 BANF1O75531 89 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ESRRAP11474 423 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 UNGP13051 313 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ATF7P17544 494 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 SERPINB4P48594 390 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 JAG1P78504 1218 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 ALCAMQ13740 583 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 CEP55Q53EZ4 464 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 FBXL13Q8NEE6 735 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 TCP10LQ8TDR4 215 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PRR11Q96HE9 360 aaPredicted RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 PI4K2AQ9BTU6 479 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 TEKT3Q9BXF9 490 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 MANSC1Q9H8J5 431 aa18.87■□□□□ 0.61
PRKCB-202ENST00000321728 STX18Q9P2W9 335 aaKnown RBP18.87■□□□□ 0.61
PRKCB-202ENST00000321728 UTRNP46939 3433 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 SLC16A4O15374 487 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 APOBEC3HQ6NTF7 200 aaKnown RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 CENPUQ71F23 418 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 LRRC6Q86X45 466 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms