RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LACTBL1A8MY62 500 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 GOLGA8KD6RF30 607 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PROSCO94903 275 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 ARF4P18085 180 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 MMP8P22894 467 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 ASPAP45381 313 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PLTPP55058 493 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 CDH8P55286 799 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 RPL7AP62424 266 aaKnown RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 C1QBPQ07021 282 aaKnown RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 ACVR2BQ13705 512 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 AMHR2Q16671 573 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 TTMPQ5BVD1 217 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 SPRYD7Q5W111 196 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 MTHFD1LQ6UB35 978 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 UBR7Q8N806 425 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 C1orf127Q8N9H9 656 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 C1orf131Q8NDD1 294 aaKnown RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 OR2W6PQ8NHA6 318 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 TFAP2BQ92481 460 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 EMID1Q96A84 441 aaPredicted RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 PARK7Q99497 189 aaKnown RBP8.05□□□□□ -1.12
IFT88-201ENST00000319980 FMO2Q99518 471 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PARVAQ9NVD7 372 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 PCYOX1Q9UHG3 505 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 RASAL2Q9UJF2 1139 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 POLIQ9UNA4 740 aa8.05□□□□□ -1.12
IFT88-201ENST00000319980 FAM187AA6NFU0 413 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ZEB2O60315 1214 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 IL18RAPO95256 599 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ITGB3P05106 788 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 CD19P15391 556 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 GJC1P36383 396 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PTGIRP43119 386 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 RAP1GAPP47736 663 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 LACTBP83111 547 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 POU5F1BQ06416 359 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PTP4A2Q12974 167 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 GRB14Q14449 540 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 UAP1Q16222 522 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 DUSP28Q4G0W2 176 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 CEP85LQ5SZL2 805 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 JADE1Q6IE81 842 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PLEKHA7Q6IQ23 1121 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 CCDC50Q8IVM0 306 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SH2D3CQ8N5H7 860 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 LINC01465Q8N7H1 131 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 OR6J1Q8NGC5 347 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 C1orf54Q8WWF1 131 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 HHIPL1Q96JK4 782 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ABHD16BQ9H3Z7 469 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PDZD7Q9H5P4 517 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SIX4Q9UIU6 781 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PRDM4Q9UKN5 801 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ATP8A1Q9Y2Q0 1164 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SCINQ9Y6U3 715 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 LRRC37A2A6NM11 1700 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 MEFVO15553 781 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 ADCY6O43306 1168 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ERLIN2O94905 339 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 MMP3P08254 477 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FGFR4P22455 802 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 COILP38432 576 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 FKBP1BP68106 108 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 TMEM62Q0P6H9 643 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ORC1Q13415 861 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SNX1Q13596 522 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SIX1Q15475 284 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 GRIK4Q16099 956 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FAM187BQ17R55 369 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FAM110CQ1W6H9 321 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 KIZQ2M2Z5 673 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 ZNF667Q5HYK9 610 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 MARCH8Q5T0T0 291 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 TMC3Q7Z5M5 1100 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PLEKHH3Q7Z736 793 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 TMEM35BQ8NCS4 154 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 NPLOC4Q8TAT6 608 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FEZF2Q8TBJ5 459 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FBXO25Q8TCJ0 367 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 HEMGNQ9BXL5 484 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SETD4Q9NVD3 440 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.04□□□□□ -1.12
IFT88-201ENST00000319980 CPA4Q9UI42 421 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 PODXLO00592 558 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 FSCN2O14926 492 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 DYNC1LI2O43237 492 aaPredicted RBP8.04□□□□□ -1.12
IFT88-201ENST00000319980 MCF2P10911 925 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 TAS2R40P59535 323 aa8.04□□□□□ -1.12
IFT88-201ENST00000319980 CYP1B1Q16678 543 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms