RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 TMEM40Q8WWA1 233 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 TMEM8AQ9HCN3 771 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 E7EVH7 732 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 AP1G2O75843 785 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 CTSHP09668 335 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 TRIM49P0CI25 452 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 TRIM49CP0CI26 452 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 STAG3L1P0CL83 205 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 GRM5P41594 1212 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 SCTRP47872 440 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 RBBP5Q15291 538 aaKnown RBP10.87□□□□□ -0.67
GINS3-201ENST00000318129 EXOC3L4Q17RC7 722 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 FBXO47Q5MNV8 452 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 C1orf53Q5VUE5 145 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 CD302Q8IX05 232 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 FAM126BQ8IXS8 530 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 THNSL1Q8IYQ7 743 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 MMRN2Q9H8L6 949 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 PLCB1Q9NQ66 1216 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
GINS3-201ENST00000318129 A0A1W2PQJ5 194 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 CD4P01730 458 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 CKBP12277 381 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 PECAM1P16284 738 aaPredicted RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 TNNI1P19237 187 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 TRIM21P19474 475 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 DLG4P78352 724 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 MYL7Q01449 175 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ZC3H12AQ5D1E8 599 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 C1orf220Q5T0J3 134 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ZNF618Q5T7W0 954 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 KRT39Q6A163 491 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 BZW1Q7L1Q6 419 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 ANKRD33Q7Z3H0 272 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 NSMCE1Q8WV22 266 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ACAP3Q96P50 834 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 CGRRF1Q99675 332 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 NOD2Q9HC29 1040 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 KRT86O43790 486 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 DNAJC8O75937 253 aaPredicted RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 CLSTN1O94985 981 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 NPTXRO95502 500 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ATP6V1G2O95670 118 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 COL6A1P12109 1028 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 PEX19P40855 299 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 GCLMP48507 274 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 MXI1P50539 228 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 GLE1Q53GS7 698 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 ZBTB41Q5SVQ8 909 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 CDR2LQ86X02 465 aaPredicted RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 SPATA4Q8NEY3 305 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 PIK3R5Q8WYR1 880 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 FAM210AQ96ND0 272 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 TSPAN18Q96SJ8 248 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 LSM14BQ9BX40 385 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 TMEM117Q9H0C3 514 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 ASB7Q9H672 318 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 STIM2Q9P246 746 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 CAPN11Q9UMQ6 739 aa10.86□□□□□ -0.67
GINS3-201ENST00000318129 LUC7L2Q9Y383 392 aaKnown RBP10.86□□□□□ -0.67
GINS3-201ENST00000318129 SELPP16109 830 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 PON1P27169 355 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 TNFSF9P41273 254 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 KRT83P78385 493 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
GINS3-201ENST00000318129 PAK2Q13177 524 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 ENOX2Q16206 610 aaKnown RBP10.85□□□□□ -0.67
GINS3-201ENST00000318129 TSR1Q2NL82 804 aaKnown RBP10.85□□□□□ -0.67
GINS3-201ENST00000318129 CFAP58Q5T655 872 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 NT5DC4Q86YG4 428 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 ATP6V1G3Q96LB4 118 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 PLEKHA5Q9HAU0 1116 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 GCNT4Q9P109 453 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 CPSF2Q9P2I0 782 aaKnown RBP10.85□□□□□ -0.67
GINS3-201ENST00000318129 FBXL5Q9UKA1 691 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 COQ4Q9Y3A0 265 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 COL6A3P12111 3177 aa10.85□□□□□ -0.67
GINS3-201ENST00000318129 GMNCA6NCL1 334 aa10.84□□□□□ -0.67
GINS3-201ENST00000318129 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
GINS3-201ENST00000318129 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
GINS3-201ENST00000318129 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms