RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MYL3P08590 195 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 SMIM10L2AP0DMW4 78 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 SMIM10L2BP0DMW5 78 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 KRT5P13647 590 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 TMOD1P28289 359 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 CST5P28325 142 aaPredicted RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 LIG4P49917 911 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PEX5P50542 639 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ATP1A2P50993 1020 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 EIF3BP55884 814 aaKnown RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 BPIFB4P59827 614 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PURAQ00577 322 aaKnown RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 WDR44Q5JSH3 913 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 CCSAPQ6IQ19 270 aaPredicted RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 RNF180Q86T96 592 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 FAM213AQ9BRX8 229 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 TRIM31Q9BZY9 425 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 CENPHQ9H3R5 247 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 TOPORSQ9NS56 1045 aaPredicted RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 PARP2Q9UGN5 583 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 SIP14410 1827 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 MBLAC1A4D2B0 266 aaPredicted RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 KPNA6O60684 536 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PPFIA2O75334 1257 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PSEN2P49810 448 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ADAM17P78536 824 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PDCLQ13371 301 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 SLFN12LQ6IEE8 588 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ZPBP2Q6X784 338 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 JAMLQ86YT9 394 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ZBTB8OSQ8IWT0 167 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 KRT35Q92764 455 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 MAGOHBQ96A72 148 aaKnown RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 TRIM11Q96F44 468 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 FNBP1Q96RU3 617 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 TARS2Q9BW92 718 aaKnown RBP15.11■□□□□ 0.01
VRK3-201ENST00000316763 IFT122Q9HBG6 1241 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ERVK-5Q9HDB9 667 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 SETD4Q9NVD3 440 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PCYOX1Q9UHG3 505 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 PCDHA3Q9Y5H8 950 aa15.11■□□□□ 0.01
VRK3-201ENST00000316763 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
VRK3-201ENST00000316763 ZEB2O60315 1214 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 ASGR1P07306 291 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 FLT3P36888 993 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 CCT5P48643 541 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 RWDD2BP57060 319 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 ZNF844Q08AG5 666 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 PSMD6Q15008 389 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 CLEC16AQ2KHT3 1053 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 ZNF677Q86XU0 584 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 KIAA0319LQ8IZA0 1049 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 ARRDC4Q8NCT1 418 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
VRK3-201ENST00000316763 CD101Q93033 1021 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 TATDN2Q93075 761 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 NLRP4Q96MN2 994 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 KATNAL1Q9BW62 490 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 FZD8Q9H461 694 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 OGDHLQ9ULD0 1010 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
VRK3-201ENST00000316763 A0A0B4J269 797 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 SRRM3A6NNA2 597 aaPredicted RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 HOXC8P31273 242 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 IFFO1Q0D2I5 559 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 MAPK6Q16659 721 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 TTC19Q6DKK2 380 aaPredicted RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 CXCL17Q6UXB2 119 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 PCSK9Q8NBP7 692 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 DDX1Q92499 740 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 MRPL4Q9BYD3 311 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 HAPLN2Q9GZV7 340 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 CNOT8Q9UFF9 292 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 PRKCBP05771 671 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 MYBL1P10243 752 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 MDH1P40925 334 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 MARCKSL1P49006 195 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 MBTD1Q05BQ5 628 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 FAM187BQ17R55 369 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 ODF2Q5BJF6 829 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 ACO2Q99798 780 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 EPN3Q9H201 632 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 ACP6Q9NPH0 428 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 LCMT1Q9UIC8 334 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 AKT3Q9Y243 479 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 ATP8A1Q9Y2Q0 1164 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 PCDHB2Q9Y5E7 798 aa15.09■□□□□ 0.01
VRK3-201ENST00000316763 KIAA0100Q14667 2235 aaKnown RBP15.09■□□□□ 0.01
VRK3-201ENST00000316763 MYO1FO00160 1098 aa15.08■□□□□ 0
VRK3-201ENST00000316763 ACKR2O00590 384 aa15.08■□□□□ 0
VRK3-201ENST00000316763 NDUFAB1O14561 156 aa15.08■□□□□ 0
VRK3-201ENST00000316763 TOM1L1O75674 476 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms