RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SARSP49591 514 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 GZMKP49863 264 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 CRB2Q5IJ48 1285 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 FAM47AQ5JRC9 791 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF783Q6ZMS7 281 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 RALYLQ86SE5 291 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SYTL1Q8IYJ3 562 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 CMTM4Q8IZR5 234 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 TXLNBQ8N3L3 684 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ATP11CQ8NB49 1132 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 OR56A3Q8NH54 315 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ARL8AQ96BM9 186 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SNX22Q96L94 193 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 AGO3Q9H9G7 860 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 BARX1Q9HBU1 254 aaPredicted RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 IL23AQ9NPF7 189 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 GPR52Q9Y2T5 361 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 TTC37Q6PGP7 1564 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SH3D21A4FU49 640 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 FOXN3O00409 490 aaPredicted RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ADAMTS3O15072 1205 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 NDST3O95803 873 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 VEGFAP15692 232 aaPredicted RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 EEF1GP26641 437 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 KIF22Q14807 665 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 RALBP1Q15311 655 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 CSRP2Q16527 193 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 OTUD7BQ6GQQ9 843 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 TLDC1Q6P9B6 456 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SEM1Q6ZVN7 128 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 UNC13DQ70J99 1090 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SUGP1Q8IWZ8 645 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 CARFQ8N187 725 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 KLHL36Q8N4N3 616 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF527Q8NB42 609 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 BRI3BPQ8WY22 251 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 IQCDQ96DY2 449 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 TMEM41AQ96HV5 264 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SUCLG2Q96I99 432 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 PACSIN1Q9BY11 444 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 MAF1Q9H063 256 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 SIDT1Q9NXL6 827 aaKnown RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 MYO1AQ9UBC5 1043 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 NR2E1Q9Y466 385 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 DENND4BO75064 1496 aaPredicted RBP4.8□□□□□ -1.64
SMCO3-201ENST00000316048 RPRD2Q5VT52 1461 aaKnown RBP4.8□□□□□ -1.64
SMCO3-201ENST00000316048 WDR7Q9Y4E6 1490 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 UBE2QL1A1L167 161 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 NRP1O14786 923 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 MT-ND5P03915 603 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 SLC6A2P23975 617 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ICA1Q05084 483 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 GAGE13Q4V321 117 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ZMAT1Q5H9K5 638 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 DCAF12L1Q5VU92 463 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ATG16L2Q8NAA4 619 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 RNF169Q8NCN4 708 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 TMIEQ8NEW7 156 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 IL17RDQ8NFM7 739 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 LPPQ93052 612 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF566Q969W8 418 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 PPP1R16BQ96T49 567 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 DPYSL5Q9BPU6 564 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 COLEC11Q9BWP8 271 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 BRD9Q9H8M2 597 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 FAM53CQ9NYF3 392 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 PZPP20742 1482 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 ARAP3Q8WWN8 1544 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 SYCP2Q9BX26 1530 aa4.8□□□□□ -1.64
SMCO3-201ENST00000316048 FAM234BA2RU67 622 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 CDHR4A6H8M9 788 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 AQP12BA6NM10 295 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 TBC1D4O60343 1298 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SLC43A1O75387 559 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 GNAI3P08754 354 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 GRK6P43250 576 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ALDH9A1P49189 494 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SLC11A2P49281 568 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 UCP3P55916 312 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 GNAI1P63096 354 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF365Q70YC5 407 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 PDZD4Q76G19 769 aaPredicted RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF761Q86XN6 746 aaPredicted RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SMAP1Q8IYB5 467 aaPredicted RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SLC15A4Q8N697 577 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 MYLK2Q9H1R3 596 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 MAST1Q9Y2H9 1570 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 CEP83Q9Y592 693 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 KCTD3Q9Y597 815 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 A0A087WZ62 844 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms