RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 FAM213AQ9BRX8 229 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 RPP25Q9BUL9 199 aaKnown RBP13.13□□□□□ -0.31
ABCD3-201ENST00000315713 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 SLC2A4RGQ9NR83 387 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCD3-201ENST00000315713 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
ABCD3-201ENST00000315713 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCD3-201ENST00000315713 SPAG17Q6Q759 2223 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 PODXLO00592 558 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 ZMYND10O75800 440 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 B3GAT3O94766 335 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 UBE2HP62256 183 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 CREMQ03060 361 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 SOX4Q06945 474 aaPredicted RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 BMT2Q1RMZ1 405 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 GRASPQ7Z6J2 395 aaPredicted RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 C18orf25Q96B23 403 aaPredicted RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
ABCD3-201ENST00000315713 UBQLN1Q9UMX0 589 aaKnown RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.12□□□□□ -0.31
ABCD3-201ENST00000315713 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 CLIC2O15247 247 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 CCL16O15467 120 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 ADAM12O43184 909 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 EXTL3O43909 919 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 KIF20AO95235 890 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 SMC2O95347 1197 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 C1RP00736 705 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 HOXD13P35453 343 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 GPC5P78333 572 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 KCNB1Q14721 858 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 PSMD5Q16401 504 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 UPP1Q16831 310 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 DGLUCYQ7Z3D6 616 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 TSPAN18Q96SJ8 248 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 ASB7Q9H672 318 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 RMND1Q9NWS8 449 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
ABCD3-201ENST00000315713 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
ABCD3-201ENST00000315713 ACACBO00763 2458 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 MAP1BP46821 2468 aaKnown RBP13.1□□□□□ -0.31
ABCD3-201ENST00000315713 TMEM189-UBE2V1I3L0A0 370 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 TGFB1I1O43294 461 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 IL18RAPO95256 599 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 C8AP07357 584 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 NFICP08651 508 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 CYP3A5P20815 502 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 RPL9P32969 192 aaKnown RBP13.1□□□□□ -0.31
ABCD3-201ENST00000315713 CYP2J2P51589 502 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
ABCD3-201ENST00000315713 PPM1LQ5SGD2 360 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 FAM171A1Q5VUB5 890 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 BRSK2Q8IWQ3 736 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
ABCD3-201ENST00000315713 DCLK2Q8N568 766 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 GOLGA5Q8TBA6 731 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 KXD1Q9BQD3 176 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 CLSTN3Q9BQT9 956 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 HCFC1R1Q9NWW0 138 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
ABCD3-201ENST00000315713 POLIQ9UNA4 740 aa13.1□□□□□ -0.31
ABCD3-201ENST00000315713 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ADRB2P07550 413 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 MCM4P33991 863 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms