RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 USP8P40818 1118 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
TUBB3-201ENST00000315491 ARID5AQ03989 594 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 FAM71AQ8IYT1 594 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 RABGGTAQ92696 567 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 MMS19Q96T76 1030 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 SDCBP2Q9H190 292 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 NRDE2Q9H7Z3 1164 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 GDAP2Q9NXN4 497 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 PCDHB4Q9Y5E5 795 aa17.26■□□□□ 0.35
TUBB3-201ENST00000315491 CCDC172P0C7W6 258 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 KRT5P13647 590 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CD58P19256 250 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 IGFBP6P24592 240 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CDK17Q00537 523 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 PAN2Q504Q3 1202 aaKnown RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CYP26C1Q6V0L0 522 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 IRF2BP2Q7Z5L9 587 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 TMTC1Q8IUR5 882 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CHP1Q99653 195 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CISHQ9NSE2 258 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 B3GAT3O94766 335 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 SERPING1P05155 500 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 SKILP12757 684 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 OR1G1P47890 313 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CDH8P55286 799 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 HGSNATQ68CP4 663 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 SMYD5Q6GMV2 418 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 HERVK_113Q902F9 699 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 ZNF689Q96CS4 500 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-201ENST00000315491 DNAJB4Q9UDY4 337 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CNTN6Q9UQ52 1028 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
TUBB3-201ENST00000315491 CYP26A1O43174 497 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 PAX3P23760 479 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 PRKCIP41743 596 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
TUBB3-201ENST00000315491 KLHL30Q0D2K2 578 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 TDRD12Q587J7 1177 aaKnown RBP17.24■□□□□ 0.35
TUBB3-201ENST00000315491 TMEM270Q6UE05 265 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 FAM124BQ9H5Z6 455 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-201ENST00000315491 ARHGAP20Q9P2F6 1191 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 SCN1AP35498 2009 aa17.24■□□□□ 0.35
TUBB3-201ENST00000315491 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 TMEM189-UBE2V1I3L0A0 370 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 CYB561D2O14569 222 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 KIF4AO95239 1232 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 DSTYKQ6XUX3 929 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 TTC39CQ8N584 583 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 TOP6BLQ8N6T0 577 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 RBBP8NLQ8NC74 664 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 SENP8Q96LD8 212 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 TMEM175Q9BSA9 504 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 RC3H2Q9HBD1 1191 aaKnown RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 CXXC1Q9P0U4 656 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 HCSTQ9UBK5 93 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 PRG3Q9Y2Y8 225 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 HUS1O60921 280 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 PLEKP08567 350 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 ZNF132P52740 706 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 SOWAHAQ2M3V2 549 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 TIGD5Q53EQ6 642 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 DPH6Q7L8W6 267 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 HASPINQ8TF76 798 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 MRPL45Q9BRJ2 306 aaKnown RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 NHEJ1Q9H9Q4 299 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-201ENST00000315491 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 L1RE1Q9UN81 338 aa17.23■□□□□ 0.35
TUBB3-201ENST00000315491 SSU72P8A0A1W2PR75 194 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 NRP1O14786 923 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 ARHGAP6O43182 974 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 CILPO75339 1184 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 TACC1O75410 805 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 ALDH2P05091 517 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 BRCC3P46736 316 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 SLC11A1P49279 550 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-201ENST00000315491 COL4A6Q14031 1691 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 SLC47A2Q86VL8 602 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 YME1L1Q96TA2 773 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
TUBB3-201ENST00000315491 MTIF3Q9H2K0 278 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms