RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RWDD2BP57060 319 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 RPL7AP62424 266 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 GPS2Q13227 327 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 RUFY4Q6ZNE9 571 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 MAATS1Q7Z4T9 603 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 SAPCD2Q86UD0 394 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 ZNF410Q86VK4 478 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 SLC13A5Q86YT5 568 aaPredicted RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 IQCKQ8N0W5 287 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 C1orf131Q8NDD1 294 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 FAM71BQ8TC56 605 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 DDX27Q96GQ7 796 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 TWNKQ96RR1 684 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 ASB7Q9H672 318 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 MED4Q9NPJ6 270 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 VPS18Q9P253 973 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 HMGXB4Q9UGU5 601 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 ADAM21Q9UKJ8 722 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 GJD2Q9UKL4 321 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 MBLAC1A4D2B0 266 aaPredicted RBP6.96□□□□□ -1.29
USP47-201ENST00000305481 GOLGA6BA6NDN3 693 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 MYO1FO00160 1098 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 RARAP10276 462 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 CTGFP29279 349 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 CDH5P33151 784 aaPredicted RBP6.96□□□□□ -1.29
USP47-201ENST00000305481 RAD23BP54727 409 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 TAS2R40P59535 323 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 ADAM17P78536 824 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 ZNF252P-AS1Q0IIN9 211 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 ORC1Q13415 861 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 CUL1Q13616 776 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 DUPD1Q68J44 220 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 TLK2Q86UE8 772 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 MREGQ8N565 214 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 CCDC26Q8TAB7 109 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 FAM49AQ9H0Q0 323 aaPredicted RBP6.96□□□□□ -1.29
USP47-201ENST00000305481 SMYD3Q9H7B4 428 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 CYTH4Q9UIA0 394 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 PCDHGC3Q9UN70 934 aa6.96□□□□□ -1.29
USP47-201ENST00000305481 KAT6AQ92794 2004 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 MANSC4A6NHS7 340 aaPredicted RBP6.96□□□□□ -1.3
USP47-201ENST00000305481 RRN3P2A6NIE6 340 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 RNF40O75150 1001 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 PHF2O75151 1096 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 ERLIN2O94905 339 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 LSM8O95777 96 aaKnown RBP6.96□□□□□ -1.3
USP47-201ENST00000305481 FAM193AP78312 1265 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 DR1Q01658 176 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 DMTNQ08495 405 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 CLUL1Q15846 466 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 CYP1B1Q16678 543 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 DENND1BQ6P3S1 775 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 IFNL1Q8IU54 200 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 SCLT1Q96NL6 688 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 SH3GL2Q99962 352 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 ELOVL4Q9GZR5 314 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 ACBD3Q9H3P7 528 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 SLC5A4Q9NY91 659 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 GINS2Q9Y248 185 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 NRCAMQ92823 1304 aa6.96□□□□□ -1.3
USP47-201ENST00000305481 TMEM191CA6NGB0 347 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 FSCN2O14926 492 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TCF4P15884 667 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CYP2B6P20813 491 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 POLR2BP30876 1174 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 HSPA9P38646 679 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 SLC1A1P43005 524 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ZNF200P98182 395 aaPredicted RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 BEX3Q00994 111 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 OGDHQ02218 1023 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 PPP1R15BQ5SWA1 713 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 SEL1L2Q5TEA6 688 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 LIN9Q5TKA1 542 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ANKS1BQ7Z6G8 1248 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 JAMLQ86YT9 394 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 SLC4A11Q8NBS3 891 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TMEM40Q8WWA1 233 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP47-201ENST00000305481 ACAP3Q96P50 834 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ZIM3Q96PE6 472 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ERP44Q9BS26 406 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 EIF2AQ9BY44 585 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 DPH5Q9H2P9 285 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 PARVAQ9NVD7 372 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TJP2Q9UDY2 1190 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 PCYOX1Q9UHG3 505 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 HTTP42858 3142 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TRPM7Q96QT4 1865 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 GOLGA6L10A0A0M3HER8 536 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 FAM155AB1AL88 458 aaPredicted RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 HAS3O00219 553 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TLR3O15455 904 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 EIF4BP23588 611 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 GRM5P41594 1212 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms