RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ADAM12O43184 909 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 PAPLNO95428 1278 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 C8AP07357 584 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 SPATA31D3P0C874 917 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 CEP135Q66GS9 1140 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 SPATA31D4Q6ZUB0 917 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 GJD3Q8N144 294 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 THEM5Q8N1Q8 247 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 VCANP13611 3396 aa18.22■□□□□ 0.51
NDUFA3-201ENST00000303553 PSMA7O14818 248 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 HUS1O60921 280 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 XYLBO75191 536 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 ABLIM3O94929 683 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 POU2F2P09086 479 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 ATF2P15336 505 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 ARPP19P56211 112 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 BFSP1Q12934 665 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 LMBRD2Q68DH5 695 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 RSPO2Q6UXX9 243 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 SLC7A14Q8TBB6 771 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 PRKD2Q9BZL6 878 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 TIMM13Q9Y5L4 95 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
NDUFA3-201ENST00000303553 WDR27A2RRH5 827 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 C19orf67A6NJJ6 358 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 PRRG1O14668 218 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 RFPL2O75678 378 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 KRT13P13646 458 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 PRCPP42785 496 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 ENPEPQ07075 957 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 ADAM9Q13443 819 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 TRPC3Q13507 836 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 TMEM86AQ8N2M4 240 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 PARD3BQ8TEW8 1205 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 POMKQ9H5K3 350 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 GDAP2Q9NXN4 497 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 AFF4Q9UHB7 1163 aaKnown RBP18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 SIX4Q9UIU6 781 aa18.2■□□□□ 0.5
NDUFA3-201ENST00000303553 PHACTR2O75167 634 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 CLDN10P78369 228 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 LRRC63Q05C16 580 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 DPH6Q7L8W6 267 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 TOP6BLQ8N6T0 577 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 CXorf38Q8TB03 319 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 ERCC4Q92889 916 aaPredicted RBP18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 BORCS6Q96GS4 357 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 MAN1B1Q9UKM7 699 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 USTQ9Y2C2 406 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
NDUFA3-201ENST00000303553 LOC730098B7Z3J9 87 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 IKBKBO14920 756 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 CETN3O15182 167 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 LRG1P02750 347 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 EPB41P11171 864 aaKnown RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 ATICP31939 592 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 CASP4P49662 377 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 MYL7Q01449 175 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 SMARCB1Q12824 385 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 GPR17Q13304 367 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 BIRC3Q13489 604 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 CENPPQ6IPU0 288 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 OTOP3Q7RTS5 596 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 FAM186BQ8IYM0 893 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 ADSSL1Q8N142 457 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 TRIML1Q8N9V2 468 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 ZNF707Q96C28 371 aaPredicted RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 ACSF2Q96CM8 615 aaPredicted RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 DHTKD1Q96HY7 919 aaPredicted RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 WDR6Q9NNW5 1121 aaKnown RBP18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 CLUHO75153 1309 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 NCOR1O75376 2440 aa18.18■□□□□ 0.5
NDUFA3-201ENST00000303553 TTC28Q96AY4 2481 aa18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 LRRIQ3A6PVS8 624 aaPredicted RBP18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 STAU1O95793 577 aaKnown RBP18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 LHX1P48742 406 aa18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 VAMP7P51809 220 aa18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 FKBP3Q00688 224 aaKnown RBP18.17■□□□□ 0.5
NDUFA3-201ENST00000303553 TSPY1Q01534 308 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms