RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 LMCD1Q9NZU5 365 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 COQ4Q9Y3A0 265 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 VWA8A3KMH1 1905 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 ASS1P00966 412 aaKnown RBP26.29■■□□□ 1.8
HOXC9-201ENST00000303450 TNNC1P63316 161 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 ADGRE1Q14246 886 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 KRT31Q15323 416 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 ZNF667Q5HYK9 610 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 KIAA0319Q5VV43 1072 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 SEMA4DQ92854 862 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 MMS19Q96T76 1030 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 CDX2Q99626 313 aaPredicted RBP26.29■■□□□ 1.8
HOXC9-201ENST00000303450 PI4K2AQ9BTU6 479 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 NDST4Q9H3R1 872 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.29■■□□□ 1.8
HOXC9-201ENST00000303450 NXF1Q9UBU9 619 aaKnown RBP26.29■■□□□ 1.8
HOXC9-201ENST00000303450 DSEQ9UL01 958 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 PCDHGC5Q9Y5F6 944 aa26.29■■□□□ 1.8
HOXC9-201ENST00000303450 TIMM13Q9Y5L4 95 aaPredicted RBP26.29■■□□□ 1.8
HOXC9-201ENST00000303450 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.28■■□□□ 1.8
HOXC9-201ENST00000303450 TYMPP19971 482 aa26.28■■□□□ 1.8
HOXC9-201ENST00000303450 PTPN14Q15678 1187 aa26.28■■□□□ 1.8
HOXC9-201ENST00000303450 WDR44Q5JSH3 913 aa26.28■■□□□ 1.8
HOXC9-201ENST00000303450 PDXDC1Q6P996 788 aa26.28■■□□□ 1.8
HOXC9-201ENST00000303450 MTMR10Q9NXD2 777 aa26.28■■□□□ 1.8
HOXC9-201ENST00000303450 ATP1A3P13637 1013 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 P4HA1P13674 534 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 NOP14P78316 857 aaKnown RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 YWHAHQ04917 246 aaPredicted RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 MIIPQ5JXC2 388 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 VARS2Q5ST30 1063 aaKnown RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 PRSS55Q6UWB4 352 aaPredicted RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 ANKS3Q6ZW76 656 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 METTL23Q86XA0 190 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 GPR65Q8IYL9 337 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 MRPL43Q8N983 215 aaKnown RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 MYLIPQ8WY64 445 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 PIK3R5Q8WYR1 880 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 ELMO3Q96BJ8 720 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 GUCD1Q96NT3 240 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 VPS16Q9H269 839 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 LIMA1Q9UHB6 759 aaKnown RBP26.27■■□□□ 1.8
HOXC9-201ENST00000303450 IRAK3Q9Y616 596 aa26.27■■□□□ 1.8
HOXC9-201ENST00000303450 C2orf71A6NGG8 1288 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 LRRN2O75325 713 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 PSMD5Q16401 504 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 WSCD1Q658N2 575 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 SPOPLQ6IQ16 392 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 TOP6BLQ8N6T0 577 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 LNX1Q8TBB1 728 aaPredicted RBP26.26■■□□□ 1.79
HOXC9-201ENST00000303450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.26■■□□□ 1.79
HOXC9-201ENST00000303450 L1RE1Q9UN81 338 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 MTCH2Q9Y6C9 303 aa26.26■■□□□ 1.79
HOXC9-201ENST00000303450 HIDE1A8MVS5 230 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 H7C4K7 107 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 CYP11A1P05108 521 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 POU3F3P20264 500 aaPredicted RBP26.25■■□□□ 1.79
HOXC9-201ENST00000303450 CREMQ03060 361 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 OVOS1Q6IE37 1185 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 DPH6Q7L8W6 267 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 PPP2R3CQ969Q6 453 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 POLIQ9UNA4 740 aa26.25■■□□□ 1.79
HOXC9-201ENST00000303450 PRRC2BQ5JSZ5 2229 aaKnown RBP26.25■■□□□ 1.79
HOXC9-201ENST00000303450 LILRB3O75022 631 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 COPB1P53618 953 aaKnown RBP26.24■■□□□ 1.79
HOXC9-201ENST00000303450 SOWAHAQ2M3V2 549 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 GBP6Q6ZN66 633 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 TMEM86AQ8N2M4 240 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 PDCL2Q8N4E4 241 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 RNF214Q8ND24 703 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 EMILIN2Q9BXX0 1053 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 GCNT4Q9P109 453 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 ATG2AQ2TAZ0 1938 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 GTPBP10A4D1E9 387 aaKnown RBP26.24■■□□□ 1.79
HOXC9-201ENST00000303450 LRRC10BA6NIK2 292 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 OAZ2O95190 189 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 MRPL58Q14197 206 aaKnown RBP26.24■■□□□ 1.79
HOXC9-201ENST00000303450 ZNF280DQ6N043 979 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 ADGRF2Q8IZF7 708 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 EHBP1Q8NDI1 1231 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 CRACR2AQ9BSW2 395 aa26.24■■□□□ 1.79
HOXC9-201ENST00000303450 NSUN3Q9H649 340 aaKnown RBP26.24■■□□□ 1.79
HOXC9-201ENST00000303450 APOBEC3GQ9HC16 384 aaKnown RBP26.24■■□□□ 1.79
HOXC9-201ENST00000303450 FOSL2P15408 326 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 RPL17P18621 184 aaKnown RBP26.23■■□□□ 1.79
HOXC9-201ENST00000303450 CTXN3Q4LDR2 81 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 SCARA5Q6ZMJ2 495 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 THEM5Q8N1Q8 247 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 NIF3L1Q9GZT8 377 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 RXFP1Q9HBX9 757 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 FNIP2Q9P278 1114 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 MTRRQ9UBK8 725 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 BACE2Q9Y5Z0 518 aa26.23■■□□□ 1.79
HOXC9-201ENST00000303450 CNPP09543 421 aaKnown RBP26.22■■□□□ 1.79
HOXC9-201ENST00000303450 LRMPQ12912 555 aa26.22■■□□□ 1.79
HOXC9-201ENST00000303450 EXOC3L4Q17RC7 722 aa26.22■■□□□ 1.79
HOXC9-201ENST00000303450 FKBP15Q5T1M5 1219 aa26.22■■□□□ 1.79
HOXC9-201ENST00000303450 LIMS2Q7Z4I7 341 aa26.22■■□□□ 1.79
HOXC9-201ENST00000303450 RBM23Q86U06 439 aaKnown RBP26.22■■□□□ 1.79
HOXC9-201ENST00000303450 LMO3Q8TAP4 145 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms