RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 USP38Q8NB14 1042 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 TMEM40Q8WWA1 233 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 GTF2IRD1Q9UHL9 959 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 STXBP5LQ9Y2K9 1186 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 NOC2LQ9Y3T9 749 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 KRIT1O00522 736 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 SEL1L2Q5TEA6 688 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 CC2D1AQ6P1N0 951 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 ZNF572Q7Z3I7 529 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 KRT12Q99456 494 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 SMYD3Q9H7B4 428 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 SYNCQ9H7C4 482 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 TARSL2A2RTX5 802 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 ZMYND10O75800 440 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 CCND3P30281 292 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 MRPS6P82932 125 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 LONRF2Q1L5Z9 754 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 RPS6KC1Q96S38 1066 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 LRRC1Q9BTT6 524 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 WNT8AQ9H1J5 351 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 CYP3A43Q9HB55 503 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 ABCB6Q9NP58 842 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 AVENQ9NQS1 362 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 KLK14Q9P0G3 267 aa15.44■□□□□ 0.06
SHCBP1-201ENST00000303383 GOLGA6L10A0A0M3HER8 536 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 RPS6KA5O75582 802 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 MTA2O94776 668 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 ASGR1P07306 291 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 CFHP08603 1231 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 ZNF132P52740 706 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 TCEAL1Q15170 157 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 CD99L2Q8TCZ2 262 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 ACTRT1Q8TDG2 376 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 SNX27Q96L92 541 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 DERAQ9Y315 318 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 TRPV2Q9Y5S1 764 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 CDY2AQ9Y6F7 541 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 IGHA2P01877 340 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 FGGP02679 453 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 CALB1P05937 261 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 MRPS25P82663 173 aaKnown RBP15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 ORC1Q13415 861 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 KCNA10Q16322 511 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 PCSK9Q8NBP7 692 aaKnown RBP15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 C1orf131Q8NDD1 294 aaKnown RBP15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 FAXDC2Q96IV6 333 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 VCPIP1Q96JH7 1222 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 HEXIM2Q96MH2 286 aaKnown RBP15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 HINFPQ9BQA5 517 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 AP1M1Q9BXS5 423 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 CARD9Q9H257 536 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 RAB21Q9UL25 225 aa15.43■□□□□ 0.06
SHCBP1-201ENST00000303383 LSM8O95777 96 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 ZNF211Q13398 564 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 CLUL1Q15846 466 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 ZFYVE27Q5T4F4 411 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 TTC39CQ8N584 583 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 UBR7Q8N806 425 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 UBQLN1Q9UMX0 589 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 TNNT3P45378 269 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 SLC7A5Q01650 507 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 GDF6Q6KF10 455 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 DCUN1D2Q6PH85 259 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 RNPC3Q96LT9 517 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 BCO2Q9BYV7 579 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 SRRDQ9UH36 339 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 HMGCRP04035 888 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 GLE1Q53GS7 698 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 RNF180Q86T96 592 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 PHF13Q86YI8 300 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 ZSWIM1Q9BR11 485 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 ZNF518BQ9C0D4 1074 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 RNF19AQ9NV58 838 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 PARVAQ9NVD7 372 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 ANK1P16157 1881 aa15.42■□□□□ 0.06
SHCBP1-201ENST00000303383 CCDC66A2RUB6 948 aa15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 MEFVO15553 781 aaPredicted RBP15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 PAEPP09466 180 aa15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 WDR93Q6P2C0 686 aa15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 TMEM176AQ96HP8 235 aa15.41■□□□□ 0.06
SHCBP1-201ENST00000303383 PTPN11Q06124 597 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms