RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CES2O00748 559 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 NOGQ13253 232 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 RASGEF1CQ8N431 466 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.32■■□□□ 1.961e-10■□□□□ 8.4
SDCCAG3-201ENST00000298537 UVRAGQ9P2Y5 699 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 RECQL4O94761 1208 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 FGGP02679 453 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 LLGL1Q15334 1064 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 UBXN11Q5T124 520 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 CD101Q93033 1021 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 SNX27Q96L92 541 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 FUT8Q9BYC5 575 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 C2CD2Q9Y426 696 aa27.32■■□□□ 1.96
SDCCAG3-201ENST00000298537 PGRMC1O00264 195 aaKnown RBP27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 GLI1P08151 1106 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 RAD23BP54727 409 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 C8orf74Q6P047 294 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 MTG1Q9BT17 334 aaPredicted RBP27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 SELENOOQ9BVL4 669 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 ELOVL4Q9GZR5 314 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 TJP2Q9UDY2 1190 aa27.31■■□□□ 1.96
SDCCAG3-201ENST00000298537 ESYT3A0FGR9 886 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 TARSL2A2RTX5 802 aaKnown RBP27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 SEPT4O43236 478 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 ADAMTS4O75173 837 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 CTSHP09668 335 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 CD19P15391 556 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 PEX5P50542 639 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 TRADDQ15628 312 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 FAM47CQ5HY64 1035 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 DENND1BQ6P3S1 775 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 RNPC3Q96LT9 517 aaKnown RBP27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 TRIM6Q9C030 488 aaPredicted RBP27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 GTF2IRD1Q9UHL9 959 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 ALDH1A1P00352 501 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 PRKAR2AP13861 404 aaKnown RBP27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 SP3Q02447 781 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 DDX47Q9H0S4 455 aaKnown RBP27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 CYTH4Q9UIA0 394 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 SCN1AP35498 2009 aa27.3■■□□□ 1.96
SDCCAG3-201ENST00000298537 O00370 1275 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 TRPA1O75762 1119 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 RARBP10826 455 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 CBX1P83916 185 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 CDC42EP1Q00587 391 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 KYAT1Q16773 422 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 DEFB115Q30KQ5 88 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 GLIPR1L2Q4G1C9 344 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 SLC4A11Q8NBS3 891 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 SCN10AQ9Y5Y9 1956 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 SPOPO43791 374 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 MAMLD1Q13495 774 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 FAM228AQ86W67 206 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 PHF13Q86YI8 300 aaPredicted RBP27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 ARRDC4Q8NCT1 418 aa27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 HNRNPLLQ8WVV9 542 aaKnown RBP27.29■■□□□ 1.96
SDCCAG3-201ENST00000298537 RAD51CO43502 376 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 CRYBB1P53674 252 aaPredicted RBP27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 POU5F1Q01860 360 aaKnown RBP27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 TRIM72Q6ZMU5 477 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 ERVK-5Q9HDB9 667 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 XPNPEP3Q9NQH7 507 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 AVENQ9NQS1 362 aaPredicted RBP27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 ITGA11Q9UKX5 1188 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 L1RE1Q9UN81 338 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 KRIT1O00522 736 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 TOMM70O94826 608 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 PYGMP11217 842 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 CYP4A22Q5TCH4 519 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 ALKAL1Q6UXT8 129 aa27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 CCNI2Q6ZMN8 369 aaPredicted RBP27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 UPF3AQ9H1J1 476 aaKnown RBP27.28■■□□□ 1.96
SDCCAG3-201ENST00000298537 CILPO75339 1184 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 ASGR1P07306 291 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 MMP8P22894 467 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 RPL7AP62424 266 aaKnown RBP27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 RBP5P82980 135 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 ZDHHC14Q8IZN3 488 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 CD99L2Q8TCZ2 262 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 RPS6KC1Q96S38 1066 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 CELF4Q9BZC1 486 aaKnown RBP27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 CARD9Q9H257 536 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 GOLGA2P5Q9HBQ8 144 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 CDY2AQ9Y6F7 541 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 GRIN2DO15399 1336 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 MEIS3P2A8K0S8 358 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 ZBTB6Q15916 424 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 KCNA10Q16322 511 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 DPH6Q7L8W6 267 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 VRTNQ9H8Y1 702 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 FAM53CQ9NYF3 392 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 STIM2Q9P246 746 aa27.27■■□□□ 1.96
SDCCAG3-201ENST00000298537 GNAT1P11488 350 aa27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 PLA2G4AP47712 749 aa27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 SMG8Q8ND04 991 aaKnown RBP27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 ST7Q9NRC1 585 aa27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 PARP2Q9UGN5 583 aa27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 NME7Q9Y5B8 376 aa27.26■■□□□ 1.95
SDCCAG3-201ENST00000298537 TCRBV7S2A1N4TA0A589 114 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 ATICP31939 592 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms