RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TAC1P20366 129 aa25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 NOP14P78316 857 aaKnown RBP25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 MAIP1Q8WWC4 291 aa25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 VPS37BQ9H9H4 285 aa25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 PDLIM7Q9NR12 457 aa25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 ARL2BPQ9Y2Y0 163 aa25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 GCAP28676 217 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 COPS2P61201 443 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 STRN3Q13033 797 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 EMC2Q15006 297 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 PKN2Q16513 984 aaKnown RBP25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 ZBTB33Q86T24 672 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 ECHDC2Q86YB7 292 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 TMEM121Q9BTD3 319 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 PITPNM3Q9BZ71 974 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 SLC9A2Q9UBY0 812 aa25.83■■□□□ 1.72
SPTSSA-201ENST00000298130 PSAPP07602 524 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 BRD2P25440 801 aaKnown RBP25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 TNFSF9P41273 254 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 OGDHQ02218 1023 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 PSMD6Q15008 389 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 CYP4A22Q5TCH4 519 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 FAM81BQ96LP2 452 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 TEPSINQ96N21 525 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 MSTO1Q9BUK6 570 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 MYBL1P10243 752 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 ATP4AP20648 1035 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 MAN1A1P33908 653 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 ZNF252P-AS1Q0IIN9 211 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 GALNTL6Q49A17 601 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 MCPH1Q8NEM0 835 aa25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 C12orf65Q9H3J6 166 aaKnown RBP25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 GEMIN8Q9NWZ8 242 aaKnown RBP25.82■■□□□ 1.72
SPTSSA-201ENST00000298130 KRT15P19012 456 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 PTP4A2Q12974 167 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 BNIP1Q12981 228 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 SMTNL2Q2TAL5 461 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 SCARA5Q6ZMJ2 495 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 SYDE1Q6ZW31 735 aaPredicted RBP25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 ZBED8Q8IZ13 594 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 FEZF2Q8TBJ5 459 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 GRID1Q9ULK0 1009 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 CDC25CP30307 473 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 ARHGEF18Q6ZSZ5 1173 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 SAMD7Q7Z3H4 446 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 NIM1KQ8IY84 436 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 KATNAL2Q8IYT4 538 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 ZNF606Q8WXB4 792 aa25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 TACO1Q9BSH4 297 aaKnown RBP25.81■■□□□ 1.72
SPTSSA-201ENST00000298130 A0A1W2PPM1 405 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 K7ERI5 159 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 PSTPIP1O43586 416 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 LIASO43766 372 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 GLRA2P23416 452 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 HMGCS2P54868 508 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 GHRHRQ02643 423 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 NBPF12Q5TAG4 269 aaPredicted RBP25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 TRIM11Q96F44 468 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 ZNRF3Q9ULT6 936 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 BPIFB4P59827 614 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 KCNT1Q5JUK3 1230 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 SYCP2LQ5T4T6 812 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 PLEKHA7Q6IQ23 1121 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 DEPTORQ8TB45 409 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 MAML1Q92585 1016 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 KIAA1586Q9HCI6 787 aa25.8■■□□□ 1.72
SPTSSA-201ENST00000298130 ZC3H11AO75152 810 aaKnown RBP eCLIP25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 EFTUD2Q15029 972 aaKnown RBP eCLIP25.79■■□□□ 1.725e-18■□□□□ 10.9
SPTSSA-201ENST00000298130 EXD1Q8NHP7 514 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 MAGEB18Q96M61 343 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 SLITRK1Q96PX8 696 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 TMEM237Q96Q45 408 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 CCDC77Q9BR77 488 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 MRPL47Q9HD33 250 aaKnown RBP25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 KLHL14Q9P2G3 628 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 TJP2Q9UDY2 1190 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 PRKAG3Q9UGI9 489 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 LRRD1A4D1F6 860 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 DPEP1P16444 411 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 ELF1P32519 619 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 NRLP54845 237 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 CAV1Q03135 178 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 NCOA4Q13772 614 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 FKBP1CQ5VVH2 108 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 ZNF677Q86XU0 584 aa25.79■■□□□ 1.72
SPTSSA-201ENST00000298130 WDR91A4D1P6 747 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 WEE2P0C1S8 567 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 RPA3P35244 121 aaPredicted RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 MCCD1P59942 119 aaPredicted RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 RNASELQ05823 741 aaKnown RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 DCUN1D2Q6PH85 259 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 ABHD15Q6UXT9 468 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 SENP7Q9BQF6 1050 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 C17orf75Q9HAS0 396 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 FAM47DPA6NHR8 397 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 SLC8A1P32418 973 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 ORC1Q13415 861 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 ZCCHC9Q8N567 271 aaKnown RBP25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 SGK1O00141 431 aa25.78■■□□□ 1.72
SPTSSA-201ENST00000298130 STAT4Q14765 748 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms