RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 POLR3CQ9BUI4 534 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 STK33Q9BYT3 514 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 SLC13A1Q9BZW2 595 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 WDCPQ9H6R7 721 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 CYP4F11Q9HBI6 524 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 PXMP2Q9NR77 195 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 ZFATQ9P243 1243 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 PPARGC1AQ9UBK2 798 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 XYLBO75191 536 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 SLC26A2P50443 739 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 MFSD10Q14728 455 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 PDK1Q15118 436 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 PATL1Q86TB9 770 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 DHX40Q8IX18 779 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 DNERQ8NFT8 737 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 C7orf25Q9BPX7 421 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 ALDH8A1Q9H2A2 487 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 C17orf75Q9HAS0 396 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 MRPL40Q9NQ50 206 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 CD274Q9NZQ7 290 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 PLA2G4CQ9UP65 541 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 MYO3AQ8NEV4 1616 aa7.26□□□□□ -1.25
GAPVD1-202ENST00000297933 H2AFYO75367 372 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 DNAJC8O75937 253 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ADORA2AP29274 412 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 DSG3P32926 999 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MDM2Q00987 491 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 IZUMO3Q5VZ72 239 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NFRKBQ6P4R8 1299 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MPZL3Q6UWV2 235 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 FAM83AQ86UY5 434 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ADGRF2Q8IZF7 708 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 TAGAPQ8N103 731 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 HPS3Q969F9 1004 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 KIFC3Q9BVG8 833 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 C6orf203Q9P0P8 240 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ZW10O43264 779 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 EFCAB14O75071 495 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SUPT3HO75486 399 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MZF1P28698 734 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 GTF2H1P32780 548 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 HIST2H2ACQ16777 129 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PPM1LQ5SGD2 360 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 IRAK1BP1Q5VVH5 260 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 HIST2H2AA3Q6FI13 130 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CCDC137Q6PK04 289 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 C11orf96Q7Z7L8 435 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 TLK2Q86UE8 772 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 GMCL1P1Q8NEA9 526 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 IPMKQ8NFU5 416 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MRPL9Q9BYD2 267 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 EPB41L4AQ9HCS5 686 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 METTL5Q9NRN9 209 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SETD4Q9NVD3 440 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PLAAQ9Y263 795 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ZSCAN9O15535 394 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 HOXC6P09630 235 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 RPA1P27694 616 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 WEE1P30291 646 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NAMPTP43490 491 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 COBLL1Q53SF7 1204 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 FAM133BQ5BKY9 247 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ZC3H12BQ5HYM0 836 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 KRT80Q6KB66 452 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CHADLQ6NUI6 762 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NT5DC4Q86YG4 428 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.253e-8■■■■□ 25.1
GAPVD1-202ENST00000297933 TRIM9Q9C026 710 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 BCL2L12Q9HB09 334 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SCUBE2Q9NQ36 999 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 RAB23Q9ULC3 237 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 TMX2Q9Y320 296 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PITPNM2Q9BZ72 1349 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 AGLP35573 1532 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CCDC78A2IDD5 438 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 ADCY3O60266 1144 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 DIAPH2O60879 1101 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 EPB42P16452 691 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PMS2P54278 862 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 PPATQ06203 517 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 NFIAQ12857 509 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 IKBKEQ14164 716 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 GRIK4Q16099 956 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CEP19Q96LK0 163 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CIPCQ9C0C6 399 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 THEGQ9P2T0 379 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 FBXO2Q9UK22 296 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SLC39A10Q9ULF5 831 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 CASTOR2A6NHX0 329 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SUPT3HB4E1H0 165 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 SEC31AO94979 1220 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 MUTP22033 750 aa7.25□□□□□ -1.25
GAPVD1-202ENST00000297933 LHX1P48742 406 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms