RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NOX5Q96PH1 765 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 SIX2Q9NPC8 291 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 XPNPEP3Q9NQH7 507 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 CNOT8Q9UFF9 292 aaKnown RBP7.1□□□□□ -1.27
TMC1-201ENST00000297784 FRMD4BQ9Y2L6 1034 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 PTCH2Q9Y6C5 1203 aa7.1□□□□□ -1.27
TMC1-201ENST00000297784 RANBP2P49792 3224 aaKnown RBP7.1□□□□□ -1.27
TMC1-201ENST00000297784 MAPK13O15264 365 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 INHAP05111 366 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 NEFHP12036 1026 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ACTN1P12814 892 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 HSPA6P17066 643 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 GARTP22102 1010 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 PON1P27169 355 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 HOXD10P28358 340 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 TNFSF9P41273 254 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 CLDN10P78369 228 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 DCAF17Q5H9S7 520 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 CPLX4Q7Z7G2 160 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 CDR2LQ86X02 465 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 AGAP11Q8TF27 550 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 POMGNT1Q8WZA1 660 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ZNF516Q92618 1163 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 TBC1D31Q96DN5 1066 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ZNF317Q96PQ6 595 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 CCDC134Q9H6E4 229 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 EHD2Q9NZN4 543 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 AJAP1Q9UKB5 411 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 EXOC7Q9UPT5 735 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 PTPRJQ12913 1337 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 RRN3P2A6NIE6 340 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 ACKR2O00590 384 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 AFPP02771 609 aaKnown RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 CST5P28325 142 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 ACOT2P49753 483 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 EFNA5P52803 228 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 KIZQ2M2Z5 673 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 CWF19L1Q69YN2 538 aaKnown RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 GDF6Q6KF10 455 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 DRAXINQ8NBI3 349 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 SH3TC2Q8TF17 1288 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 DNAJB3Q8WWF6 145 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 BAP1Q92560 729 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 XPO6Q96QU8 1125 aaKnown RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 FAM213AQ9BRX8 229 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 EDEM3Q9BZQ6 932 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 METTL14Q9HCE5 456 aaKnown RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 FAM207AQ9NSI2 230 aaPredicted RBP7.09□□□□□ -1.27
TMC1-201ENST00000297784 AKT3Q9Y243 479 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 SH3BP1Q9Y3L3 701 aa7.09□□□□□ -1.27
TMC1-201ENST00000297784 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 ESYT3A0FGR9 886 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 ZSCAN5CA6NGD5 496 aaPredicted RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 H0YCG3 227 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 WFS1O76024 890 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 LINGO3P0C6S8 592 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 NQO1P15559 274 aaKnown RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 FGFR4P22455 802 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 TMOD1P28289 359 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 HOXA11P31270 313 aaPredicted RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 CXCR5P32302 372 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 MAGEA1P43355 309 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 FMO5P49326 533 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 LIG4P49917 911 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 VAMP7P51809 220 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 ROR2Q01974 943 aaKnown RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 STRN3Q13033 797 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 FAM187BQ17R55 369 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 ZPBP2Q6X784 338 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 TMEM192Q8IY95 271 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 GTF2IRD1Q9UHL9 959 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 CNTNAP2Q9UHC6 1331 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 GOLGA6L10A0A0M3HER8 536 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 RAD51CO43502 376 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 NCK2O43639 380 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 TOM1L1O75674 476 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 AP1G2O75843 785 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 RTN3O95197 1032 aaPredicted RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 PRKCBP05771 671 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 GRK4P32298 578 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 ABCD1P33897 745 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 EIF4A3P38919 411 aaKnown RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 MCL1Q07820 350 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 CYP24A1Q07973 514 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 MAPK6Q16659 721 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 EEF1DP3Q658K8 133 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 SLC30A9Q6PML9 568 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 FAM43BQ6ZT52 329 aaPredicted RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 INTS8Q75QN2 995 aaKnown RBP7.08□□□□□ -1.28
TMC1-201ENST00000297784 GPD1LQ8N335 351 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 BICD1Q96G01 975 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 CPB2Q96IY4 423 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 MS4A14Q96JA4 679 aa7.08□□□□□ -1.28
TMC1-201ENST00000297784 KRT12Q99456 494 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms