RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 LILRA4P59901 499 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 GTF2BQ00403 316 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 TEAD2Q15562 447 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 KIAA2013Q8IYS2 634 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 POMGNT1Q8WZA1 660 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 SENP8Q96LD8 212 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 ASB7Q9H672 318 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 STK17AQ9UEE5 414 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
TPM1-202ENST00000288398 AGO2Q9UKV8 859 aaKnown RBP15.21■□□□□ 0.03
TPM1-202ENST00000288398 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 PCDHGA2Q9Y5H1 932 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 NFICP08651 508 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 VIPR2P41587 438 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 TUFMP49411 452 aaKnown RBP15.2■□□□□ 0.02
TPM1-202ENST00000288398 ACOT2P49753 483 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 KPNA1P52294 538 aaPredicted RBP15.2■□□□□ 0.02
TPM1-202ENST00000288398 EPHA5P54756 1037 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 POSTNQ15063 836 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 RRAGBQ5VZM2 374 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 C9orf57Q5W0N0 161 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 VITQ6UXI7 678 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 ERMP1Q7Z2K6 904 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 FAM3CQ92520 227 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 CLDN23Q96B33 292 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 HVCN1Q96D96 273 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 ZSWIM3Q96MP5 696 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
TPM1-202ENST00000288398 IER2Q9BTL4 223 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 CCSER1Q9C0I3 900 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 ATXN3LQ9H3M9 355 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 MRPL44Q9H9J2 332 aaKnown RBP15.2■□□□□ 0.02
TPM1-202ENST00000288398 ZNF334Q9HCZ1 680 aaPredicted RBP15.2■□□□□ 0.02
TPM1-202ENST00000288398 ZSCAN32Q9NX65 697 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 PIAS3Q9Y6X2 628 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
TPM1-202ENST00000288398 PDCD11Q14690 1871 aaKnown RBP15.19■□□□□ 0.02
TPM1-202ENST00000288398 MTMR11A4FU01 709 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 HEPACAM2A8MVW5 462 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 IL18RAPO95256 599 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 GAP43P17677 238 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 TAF6P49848 677 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 NRLP54845 237 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 MGAT5BQ3V5L5 792 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 SLC39A12Q504Y0 691 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 ZC2HC1CQ53FD0 456 aaPredicted RBP15.19■□□□□ 0.02
TPM1-202ENST00000288398 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 MFSD6LQ8IWD5 586 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 ATAD1Q8NBU5 361 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 SHKBP1Q8TBC3 707 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 MSANTD3Q96H12 275 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 ZNF560Q96MR9 790 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 PYM1Q9BRP8 204 aaKnown RBP15.19■□□□□ 0.02
TPM1-202ENST00000288398 FAM126AQ9BYI3 521 aaPredicted RBP15.19■□□□□ 0.02
TPM1-202ENST00000288398 TRPV4Q9HBA0 871 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 TRPV5Q9NQA5 729 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 DPP3Q9NY33 737 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 RAB23Q9ULC3 237 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
TPM1-202ENST00000288398 MYO15AQ9UKN7 3530 aa15.19■□□□□ 0.02
TPM1-202ENST00000288398 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 CYB561D2O14569 222 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 PPEF2O14830 753 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 FAM189A1O60320 539 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 ADRB2P07550 413 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 GABRR2P28476 465 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 GRIN1Q05586 938 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 SMARCB1Q12824 385 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 LRRC32Q14392 662 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 SV2CQ496J9 727 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 MAML2Q8IZL2 1156 aaPredicted RBP15.18■□□□□ 0.02
TPM1-202ENST00000288398 SYCP3Q8IZU3 236 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 TMEM130Q8N3G9 435 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
TPM1-202ENST00000288398 PSMG2Q969U7 264 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 EPSTI1Q96J88 318 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 ST6GALNAC4Q9H4F1 302 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 HSFX1Q9UBD0 423 aa15.18■□□□□ 0.02
TPM1-202ENST00000288398 GVINP1Q7Z2Y8 2422 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 SPTBN4Q9H254 2564 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 ANKRD63C9JTQ0 380 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 PIRO00625 290 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 MOSPD3O75425 235 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 GCNT3O95395 438 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 IDEP14735 1019 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 CDC25CP30307 473 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 PNPLA4P41247 253 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 CCR3P51677 355 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 TSPY1Q01534 308 aa15.17■□□□□ 0.02
TPM1-202ENST00000288398 POU5F1Q01860 360 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms