RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 NR2E1Q9Y466 385 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 LOC730098B7Z3J9 87 aa27.09■■□□□ 1.93
PDF-201ENST00000288022 PRRG1O14668 218 aa27.09■■□□□ 1.93
PDF-201ENST00000288022 ZNF658Q5TYW1 1059 aaPredicted RBP27.09■■□□□ 1.93
PDF-201ENST00000288022 ZNF707Q96C28 371 aaPredicted RBP27.09■■□□□ 1.93
PDF-201ENST00000288022 SIX4Q9UIU6 781 aa27.09■■□□□ 1.93
PDF-201ENST00000288022 FRMD4BQ9Y2L6 1034 aa27.09■■□□□ 1.93
PDF-201ENST00000288022 C2orf16Q68DN1 1984 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 OR6C75A6NL08 312 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 ABLIM3O94929 683 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 HNRNPA1P09651 372 aaKnown RBP eCLIP27.08■■□□□ 1.93
PDF-201ENST00000288022 TPGS2Q68CL5 300 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 SCARA3Q6AZY7 606 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 ELOA2Q8IYF1 753 aaPredicted RBP27.08■■□□□ 1.93
PDF-201ENST00000288022 CXorf38Q8TB03 319 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 POLIQ9UNA4 740 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 TSC2P49815 1807 aa27.08■■□□□ 1.93
PDF-201ENST00000288022 CCL16O15467 120 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 CYP11A1P05108 521 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 OR4Q2P0C623 313 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 ATF2P15336 505 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 NR2F2P24468 414 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 CASP4P49662 377 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 MYO1EQ12965 1108 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 MYBPC2Q14324 1141 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 UVSSAQ2YD98 709 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 WSCD1Q658N2 575 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 TRAPPC11Q7Z392 1133 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 SPATA20Q8TB22 786 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 TMEM174Q8WUU8 243 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 BORCS6Q96GS4 357 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 IPO9Q96P70 1041 aaKnown RBP27.07■■□□□ 1.92
PDF-201ENST00000288022 CYP4F11Q9HBI6 524 aa27.07■■□□□ 1.92
PDF-201ENST00000288022 XYLBO75191 536 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 RPL13P26373 211 aaKnown RBP27.06■■□□□ 1.92
PDF-201ENST00000288022 HOXA9P31269 272 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 ADCY1Q08828 1119 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 ISM2Q6H9L7 571 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 RNF19BQ6ZMZ0 732 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 THEM5Q8N1Q8 247 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 HPDLQ96IR7 371 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 RHOBTB2Q9BYZ6 727 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 GTPBP4Q9BZE4 634 aaKnown RBP27.06■■□□□ 1.92
PDF-201ENST00000288022 SNX9Q9Y5X1 595 aa27.06■■□□□ 1.92
PDF-201ENST00000288022 HUS1O60921 280 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 PRCPP42785 496 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 RNF135Q8IUD6 432 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 TDRD5Q8NAT2 981 aaKnown RBP27.05■■□□□ 1.92
PDF-201ENST00000288022 PLEKHO2Q8TD55 490 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 PGLYRP2Q96PD5 576 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 WDR6Q9NNW5 1121 aaKnown RBP27.05■■□□□ 1.92
PDF-201ENST00000288022 AFF4Q9UHB7 1163 aaKnown RBP27.05■■□□□ 1.92
PDF-201ENST00000288022 CLUHO75153 1309 aa27.05■■□□□ 1.92
PDF-201ENST00000288022 DENND4AQ7Z401 1863 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 C2CD4DB7Z1M9 353 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 PHACTR2O75167 634 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 PAPLNO95428 1278 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 LRG1P02750 347 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 ADAM9Q13443 819 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 NFIL3Q16649 462 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 RTL10Q7L3V2 364 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 TCEAL8Q8IYN2 117 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 PARD3BQ8TEW8 1205 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 ZNF516Q92618 1163 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 KHSRPQ92945 711 aaKnown RBP eCLIP27.04■■□□□ 1.92
PDF-201ENST00000288022 TMEM209Q96SK2 561 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 GZF1Q9H116 711 aaPredicted RBP27.04■■□□□ 1.92
PDF-201ENST00000288022 MAN1B1Q9UKM7 699 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 TTC28Q96AY4 2481 aa27.04■■□□□ 1.92
PDF-201ENST00000288022 LRRIQ3A6PVS8 624 aaPredicted RBP27.03■■□□□ 1.92
PDF-201ENST00000288022 SEC24AO95486 1093 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 BIRC3Q13489 604 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 TRPC3Q13507 836 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 GRASPQ7Z6J2 395 aaPredicted RBP27.03■■□□□ 1.92
PDF-201ENST00000288022 OR10T2Q8NGX3 314 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 ACSF2Q96CM8 615 aaPredicted RBP27.03■■□□□ 1.92
PDF-201ENST00000288022 GDAP2Q9NXN4 497 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 MAFFQ9ULX9 164 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 L1RE1Q9UN81 338 aa27.03■■□□□ 1.92
PDF-201ENST00000288022 CLSTN1O94985 981 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 AP3M2P53677 418 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 GPR17Q13304 367 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 STIM1Q13586 685 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 EDRF1Q3B7T1 1238 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 ZCWPW2Q504Y3 356 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 OTOP3Q7RTS5 596 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 PDCL2Q8N4E4 241 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 TSG101Q99816 390 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 USTQ9Y2C2 406 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 INSL5Q9Y5Q6 135 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 C5orf42Q9H799 3197 aa27.02■■□□□ 1.92
PDF-201ENST00000288022 AKAP3O75969 853 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 CST3P01034 146 aaPredicted RBP27.01■■□□□ 1.91
PDF-201ENST00000288022 KRT13P13646 458 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 GBP2P32456 591 aaPredicted RBP27.01■■□□□ 1.91
PDF-201ENST00000288022 DLG4P78352 724 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 COBLL1Q53SF7 1204 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 FAM186BQ8IYM0 893 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 TMEM86AQ8N2M4 240 aa27.01■■□□□ 1.91
PDF-201ENST00000288022 TMC2Q8TDI7 906 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms