RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 BATF3Q9NR55 127 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CYP2C19P33261 490 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CDY2AQ9Y6F7 541 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CDY1Q9Y6F8 540 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 SCGNO76038 276 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 SEC24BO95487 1268 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 BTKQ06187 659 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 RMND5AQ9H871 391 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 POU1F1P28069 291 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CENPLQ8N0S6 344 aaPredicted RBP13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 MED15Q96RN5 788 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 FTLP02792 175 aaPredicted RBP13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 NANOGNBQ7Z5D8 188 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 SYTL1Q8IYJ3 562 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 LRRC71Q8N4P6 559 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 CAAP1Q9H8G2 361 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 DBNDD1Q9H9R9 158 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 NEK6Q9HC98 313 aa13.78□□□□□ -0.2
SMARCA5-201ENST00000283131 UBE3CQ15386 1083 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 CDC73Q6P1J9 531 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 ZNF786Q8N393 782 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 MCM8Q9UJA3 840 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 MTMR6Q9Y217 621 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 TRIM43BA6NCK2 446 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 SMIM22K7EJ46 135 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 WWP2O00308 870 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 IFNA14P01570 189 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 ARF4P18085 180 aaPredicted RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 ULK3Q6PHR2 472 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 SPATA21Q7Z572 469 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 CACTIN-AS1Q8N1I8 211 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 TRIM39Q9HCM9 518 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 A0A0D9SFI3 127 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 USP17L3A6NCW0 530 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 USP17L4A6NCW7 530 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 SOAT2O75908 522 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 NR3C1P04150 777 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 PTPN7P35236 360 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 STX5Q13190 355 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 TMEM132BQ14DG7 1078 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 USP17L1Q7RTZ2 530 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 GRAMD1CQ8IYS0 662 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 CASP10Q92851 521 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 CLCC1Q96S66 551 aa13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 SAMSN1Q9NSI8 373 aaKnown RBP13.77□□□□□ -0.2
SMARCA5-201ENST00000283131 HMBSP08397 361 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PRELPP51888 382 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PLCL1Q15111 1095 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 GPD1LQ8N335 351 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 MMP19Q99542 508 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PRMT1Q99873 361 aaKnown RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 EPC1Q9H2F5 836 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PPP2R1BP30154 601 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 DHX34Q14147 1143 aaKnown RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 TOMM20Q15388 145 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 CYP7B1O75881 506 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PDE9AO76083 593 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 MMP1P03956 469 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 AP3M2P53677 418 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PHACTR4Q8IZ21 702 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 RBAKQ9NYW8 714 aaPredicted RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 TIAM1Q13009 1591 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 KBTBD13C9JR72 458 aa13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 DALRD3Q5D0E6 543 aaKnown RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 SYDE1Q6ZW31 735 aaPredicted RBP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 AGGF1Q8N302 714 aaeCLIP13.77□□□□□ -0.21
SMARCA5-201ENST00000283131 PFASO15067 1338 aa13.76□□□□□ -0.21
SMARCA5-201ENST00000283131 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
SMARCA5-201ENST00000283131 PDE5AO76074 875 aa13.76□□□□□ -0.21
SMARCA5-201ENST00000283131 RCVRNP35243 200 aa13.76□□□□□ -0.21
SMARCA5-201ENST00000283131 SPRP35270 261 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms