RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PTRHD1Q6GMV3 140 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 NLGN1Q8N2Q7 840 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 COA7Q96BR5 231 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ERP27Q96DN0 273 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 RBM15Q96T37 977 aaKnown RBP eCLIP9.11□□□□□ -0.952e-7■■■■■ 27.1
NIPBL-201ENST00000282516 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ARMC7Q9H6L4 198 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PLEKHG1Q9ULL1 1385 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PHF2O75151 1096 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 EFNA5P52803 228 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 NPEPPSP55786 919 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SESN2P58004 480 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TSNQ15631 228 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SGO1Q5FBB7 561 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MAP4K1Q92918 833 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 GPR108Q9NPR9 543 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ITGB1BP2Q9UKP3 347 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 KIAA0391O15091 583 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PDE8BO95263 885 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CCDC130P13994 396 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ATP6V1C1P21283 382 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 GRIK1P39086 918 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 VHLP40337 213 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 GYS2P54840 703 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TWF1Q12792 350 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 FAM83BQ5T0W9 1011 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PEG10Q86TG7 708 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 C1orf54Q8WWF1 131 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 FAM213AQ9BRX8 229 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 STN1Q9H668 368 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CHN1P15882 459 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SERPINH1P50454 418 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CDC42BPGQ6DT37 1551 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MMGT1Q8N4V1 131 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MTSS1O43312 755 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 FNTAP49354 379 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 UGT3A1Q6NUS8 523 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TMEM179Q6ZVK1 233 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SPATA2LQ8IUW3 424 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CENPLQ8N0S6 344 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PIGOQ8TEQ8 1089 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ARHGEF26Q96DR7 871 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 EDC3Q96F86 508 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 APOL4Q9BPW4 351 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PCDHB6Q9Y5E3 794 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 V9GYQ6 96 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TBKBP1A7MCY6 615 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ZBTB5O15062 677 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 TGFBR2P37173 567 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PEX5P50542 639 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 TGM3Q08188 693 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PKP1Q13835 747 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 STILQ15468 1287 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 DUOXA2Q1HG44 320 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 CHSY1Q86X52 802 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 WDR36Q8NI36 951 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 EAF2Q96CJ1 260 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 GMEB1Q9Y692 573 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 EIF4A1P60842 406 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF211Q13398 564 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF394Q53GI3 561 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 VPS33BQ9H267 617 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ING3Q9NXR8 418 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 KLHL3Q9UH77 587 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 EIF3LQ9Y262 564 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RGS20O76081 388 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 POLBP06746 335 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 UBTFL6P0CB48 400 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 FAM25AB3EWG3 89 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 FAM25CB3EWG5 89 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 FAM25GB3EWG6 89 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.957e-6■□□□□ 9
NIPBL-201ENST00000282516 TBC1D12O60347 775 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 CLTBP09497 229 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 AKAP5P24588 427 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 IL12RB1P42701 662 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 HNMTP50135 292 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 NFIL3Q16649 462 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PTPN21Q16825 1174 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 STKLD1Q8NE28 680 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 IL17RAQ96F46 866 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RNPEPQ9H4A4 650 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 COPRSQ9NQ92 184 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 USP21Q9UK80 565 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RTN2O75298 545 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 EPB42P16452 691 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RCN1Q15293 331 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms